Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC14.84□□□□□ -0.03
Trbv13-1A0A0B4J1P8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC14.84□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.84□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Golgb1-201ENSMUST00000023534 498 ntBASIC14.84□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv13-1A0A0B4J1P8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv13-1A0A0B4J1P8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC14.83□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC14.81□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.8□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC14.8□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.8□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.8□□□□□ -0.04
Trbv13-1A0A0B4J1P8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.79□□□□□ -0.04
Trbv13-1A0A0B4J1P8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC14.79□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.78□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Gm12821-201ENSMUST00000120022 600 ntBASIC14.78□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv13-1A0A0B4J1P8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv13-1A0A0B4J1P8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv13-1A0A0B4J1P8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC14.77□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Gm4430-201ENSMUST00000192413 1943 ntBASIC14.77□□□□□ -0.04
Trbv13-1A0A0B4J1P8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms