Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-52A0A0A6YXC3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC15.22■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-52A0A0A6YXC3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC15.21■□□□□ 0.03
Ighv1-52A0A0A6YXC3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC15.21■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC15.2■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Gm21956-201ENSMUST00000179946 522 ntBASIC15.2■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.2■□□□□ 0.02
Ighv1-52A0A0A6YXC3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-52A0A0A6YXC3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.2■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC15.19■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-52A0A0A6YXC3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC15.19■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC15.18■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC15.18■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ighv1-52A0A0A6YXC3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-52A0A0A6YXC3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC15.17■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Gm12821-201ENSMUST00000120022 600 ntBASIC15.16■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC15.16■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-52A0A0A6YXC3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC15.15■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.15■□□□□ 0.02
Ighv1-52A0A0A6YXC3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-52A0A0A6YXC3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC15.15■□□□□ 0.02
Ighv1-52A0A0A6YXC3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms