Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav18A0A075B656 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav18A0A075B656 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav18A0A075B656 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav18A0A075B656 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav18A0A075B656 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav18A0A075B656 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav18A0A075B656 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trav18A0A075B656 Iqck-206ENSMUST00000208658 2891 ntBASIC16.39■□□□□ 0.21
Trav18A0A075B656 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trav18A0A075B656 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trav18A0A075B656 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trav18A0A075B656 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav18A0A075B656 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.39■□□□□ 0.21
Trav18A0A075B656 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav18A0A075B656 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trav18A0A075B656 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav18A0A075B656 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav18A0A075B656 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.38■□□□□ 0.21
Trav18A0A075B656 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav18A0A075B656 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav18A0A075B656 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav18A0A075B656 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav18A0A075B656 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav18A0A075B656 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.38■□□□□ 0.21
Trav18A0A075B656 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav18A0A075B656 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trav18A0A075B656 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav18A0A075B656 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav18A0A075B656 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav18A0A075B656 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav18A0A075B656 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav18A0A075B656 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav18A0A075B656 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav18A0A075B656 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav18A0A075B656 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav18A0A075B656 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.37■□□□□ 0.21
Trav18A0A075B656 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav18A0A075B656 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav18A0A075B656 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav18A0A075B656 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.37■□□□□ 0.21
Trav18A0A075B656 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav18A0A075B656 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trav18A0A075B656 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav18A0A075B656 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav18A0A075B656 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav18A0A075B656 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav18A0A075B656 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav18A0A075B656 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav18A0A075B656 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav18A0A075B656 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav18A0A075B656 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.36■□□□□ 0.21
Trav18A0A075B656 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav18A0A075B656 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav18A0A075B656 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav18A0A075B656 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav18A0A075B656 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.35■□□□□ 0.21
Trav18A0A075B656 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav18A0A075B656 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav18A0A075B656 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav18A0A075B656 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav18A0A075B656 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav18A0A075B656 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav18A0A075B656 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav18A0A075B656 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav18A0A075B656 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Trav18A0A075B656 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav18A0A075B656 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav18A0A075B656 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav18A0A075B656 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav18A0A075B656 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav18A0A075B656 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Trav18A0A075B656 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav18A0A075B656 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav18A0A075B656 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav18A0A075B656 Gm40881-201ENSMUST00000223397 166 ntBASIC16.33■□□□□ 0.2
Trav18A0A075B656 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav18A0A075B656 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav18A0A075B656 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav18A0A075B656 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav18A0A075B656 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav18A0A075B656 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trav18A0A075B656 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav18A0A075B656 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav18A0A075B656 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav18A0A075B656 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav18A0A075B656 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav18A0A075B656 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav18A0A075B656 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trav18A0A075B656 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Trav18A0A075B656 Gm7143-201ENSMUST00000222811 859 ntBASIC16.32■□□□□ 0.2
Trav18A0A075B656 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav18A0A075B656 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav18A0A075B656 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav18A0A075B656 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav18A0A075B656 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav18A0A075B656 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav18A0A075B656 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav18A0A075B656 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav18A0A075B656 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 102.7 ms