Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav16A0A075B653 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trav16A0A075B653 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Trav16A0A075B653 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav16A0A075B653 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav16A0A075B653 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav16A0A075B653 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav16A0A075B653 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav16A0A075B653 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav16A0A075B653 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav16A0A075B653 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav16A0A075B653 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav16A0A075B653 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav16A0A075B653 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav16A0A075B653 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav16A0A075B653 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav16A0A075B653 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav16A0A075B653 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav16A0A075B653 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav16A0A075B653 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav16A0A075B653 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trav16A0A075B653 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.38■□□□□ 0.05
Trav16A0A075B653 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trav16A0A075B653 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav16A0A075B653 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav16A0A075B653 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav16A0A075B653 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.38■□□□□ 0.05
Trav16A0A075B653 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav16A0A075B653 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav16A0A075B653 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav16A0A075B653 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav16A0A075B653 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav16A0A075B653 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav16A0A075B653 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav16A0A075B653 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav16A0A075B653 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav16A0A075B653 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav16A0A075B653 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav16A0A075B653 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav16A0A075B653 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trav16A0A075B653 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.37■□□□□ 0.05
Trav16A0A075B653 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav16A0A075B653 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav16A0A075B653 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav16A0A075B653 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav16A0A075B653 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav16A0A075B653 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav16A0A075B653 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav16A0A075B653 Gm11847-201ENSMUST00000125165 1119 ntBASIC15.36■□□□□ 0.05
Trav16A0A075B653 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Trav16A0A075B653 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav16A0A075B653 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav16A0A075B653 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
Trav16A0A075B653 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav16A0A075B653 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav16A0A075B653 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav16A0A075B653 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav16A0A075B653 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Trav16A0A075B653 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav16A0A075B653 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav16A0A075B653 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav16A0A075B653 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav16A0A075B653 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav16A0A075B653 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav16A0A075B653 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav16A0A075B653 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav16A0A075B653 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav16A0A075B653 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav16A0A075B653 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav16A0A075B653 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav16A0A075B653 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC15.35■□□□□ 0.05
Trav16A0A075B653 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav16A0A075B653 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav16A0A075B653 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav16A0A075B653 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav16A0A075B653 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav16A0A075B653 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav16A0A075B653 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav16A0A075B653 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav16A0A075B653 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav16A0A075B653 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav16A0A075B653 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav16A0A075B653 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav16A0A075B653 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trav16A0A075B653 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav16A0A075B653 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav16A0A075B653 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav16A0A075B653 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav16A0A075B653 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav16A0A075B653 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.34■□□□□ 0.05
Trav16A0A075B653 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav16A0A075B653 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Trav16A0A075B653 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav16A0A075B653 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
Trav16A0A075B653 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav16A0A075B653 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav16A0A075B653 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav16A0A075B653 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Trav16A0A075B653 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav16A0A075B653 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms