Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9-1A0A075B601 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9-1A0A075B601 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9-1A0A075B601 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9-1A0A075B601 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9-1A0A075B601 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9-1A0A075B601 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9-1A0A075B601 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9-1A0A075B601 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9-1A0A075B601 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9-1A0A075B601 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
Trav9-1A0A075B601 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trav9-1A0A075B601 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC15.61■□□□□ 0.09
Trav9-1A0A075B601 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.61■□□□□ 0.09
Trav9-1A0A075B601 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trav9-1A0A075B601 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9-1A0A075B601 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9-1A0A075B601 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9-1A0A075B601 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9-1A0A075B601 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9-1A0A075B601 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav9-1A0A075B601 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC15.6■□□□□ 0.09
Trav9-1A0A075B601 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav9-1A0A075B601 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Trav9-1A0A075B601 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9-1A0A075B601 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9-1A0A075B601 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9-1A0A075B601 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9-1A0A075B601 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trav9-1A0A075B601 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9-1A0A075B601 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9-1A0A075B601 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9-1A0A075B601 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9-1A0A075B601 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9-1A0A075B601 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9-1A0A075B601 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9-1A0A075B601 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC15.59■□□□□ 0.09
Trav9-1A0A075B601 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.59■□□□□ 0.09
Trav9-1A0A075B601 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9-1A0A075B601 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9-1A0A075B601 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9-1A0A075B601 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9-1A0A075B601 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9-1A0A075B601 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9-1A0A075B601 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9-1A0A075B601 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9-1A0A075B601 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9-1A0A075B601 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9-1A0A075B601 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav9-1A0A075B601 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9-1A0A075B601 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.58■□□□□ 0.09
Trav9-1A0A075B601 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav9-1A0A075B601 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav9-1A0A075B601 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC15.58■□□□□ 0.08
Trav9-1A0A075B601 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC15.58■□□□□ 0.08
Trav9-1A0A075B601 Gm5131-201ENSMUST00000212776 1238 ntBASIC15.58■□□□□ 0.08
Trav9-1A0A075B601 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav9-1A0A075B601 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav9-1A0A075B601 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav9-1A0A075B601 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trav9-1A0A075B601 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Trav9-1A0A075B601 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav9-1A0A075B601 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav9-1A0A075B601 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav9-1A0A075B601 Gm40881-201ENSMUST00000223397 166 ntBASIC15.57■□□□□ 0.08
Trav9-1A0A075B601 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav9-1A0A075B601 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav9-1A0A075B601 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav9-1A0A075B601 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav9-1A0A075B601 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trav9-1A0A075B601 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.56■□□□□ 0.08
Trav9-1A0A075B601 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.56■□□□□ 0.08
Trav9-1A0A075B601 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC15.56■□□□□ 0.08
Trav9-1A0A075B601 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trav9-1A0A075B601 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav9-1A0A075B601 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav9-1A0A075B601 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav9-1A0A075B601 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav9-1A0A075B601 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9-1A0A075B601 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9-1A0A075B601 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9-1A0A075B601 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9-1A0A075B601 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9-1A0A075B601 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9-1A0A075B601 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9-1A0A075B601 Gm15820-201ENSMUST00000201566 728 ntBASIC15.55■□□□□ 0.08
Trav9-1A0A075B601 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9-1A0A075B601 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trav9-1A0A075B601 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav9-1A0A075B601 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9-1A0A075B601 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9-1A0A075B601 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9-1A0A075B601 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9-1A0A075B601 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9-1A0A075B601 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9-1A0A075B601 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav9-1A0A075B601 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav9-1A0A075B601 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav9-1A0A075B601 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav9-1A0A075B601 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms