Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5-1A0A075B5Z7 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5-1A0A075B5Z7 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5-1A0A075B5Z7 Serp2-204ENSMUST00000228055 705 ntBASIC17.25■□□□□ 0.35
Trav5-1A0A075B5Z7 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5-1A0A075B5Z7 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5-1A0A075B5Z7 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5-1A0A075B5Z7 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5-1A0A075B5Z7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.25■□□□□ 0.35
Trav5-1A0A075B5Z7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trav5-1A0A075B5Z7 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.24■□□□□ 0.35
Trav5-1A0A075B5Z7 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav5-1A0A075B5Z7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Trav5-1A0A075B5Z7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.24■□□□□ 0.35
Trav5-1A0A075B5Z7 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav5-1A0A075B5Z7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav5-1A0A075B5Z7 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.24■□□□□ 0.35
Trav5-1A0A075B5Z7 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.24■□□□□ 0.35
Trav5-1A0A075B5Z7 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav5-1A0A075B5Z7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav5-1A0A075B5Z7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav5-1A0A075B5Z7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav5-1A0A075B5Z7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav5-1A0A075B5Z7 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav5-1A0A075B5Z7 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav5-1A0A075B5Z7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav5-1A0A075B5Z7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trav5-1A0A075B5Z7 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trav5-1A0A075B5Z7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav5-1A0A075B5Z7 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.23■□□□□ 0.35
Trav5-1A0A075B5Z7 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav5-1A0A075B5Z7 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav5-1A0A075B5Z7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.22■□□□□ 0.35
Trav5-1A0A075B5Z7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav5-1A0A075B5Z7 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.22■□□□□ 0.35
Trav5-1A0A075B5Z7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav5-1A0A075B5Z7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav5-1A0A075B5Z7 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav5-1A0A075B5Z7 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav5-1A0A075B5Z7 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav5-1A0A075B5Z7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Trav5-1A0A075B5Z7 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav5-1A0A075B5Z7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav5-1A0A075B5Z7 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.21■□□□□ 0.35
Trav5-1A0A075B5Z7 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav5-1A0A075B5Z7 Gm12251-201ENSMUST00000117893 792 ntBASIC17.21■□□□□ 0.35
Trav5-1A0A075B5Z7 Gm43017-201ENSMUST00000198296 752 ntBASIC17.21■□□□□ 0.35
Trav5-1A0A075B5Z7 Gm43173-201ENSMUST00000202246 593 ntBASIC17.21■□□□□ 0.35
Trav5-1A0A075B5Z7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav5-1A0A075B5Z7 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trav5-1A0A075B5Z7 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trav5-1A0A075B5Z7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.21■□□□□ 0.34
Trav5-1A0A075B5Z7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav5-1A0A075B5Z7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav5-1A0A075B5Z7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav5-1A0A075B5Z7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav5-1A0A075B5Z7 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav5-1A0A075B5Z7 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav5-1A0A075B5Z7 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav5-1A0A075B5Z7 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.2■□□□□ 0.34
Trav5-1A0A075B5Z7 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav5-1A0A075B5Z7 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav5-1A0A075B5Z7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav5-1A0A075B5Z7 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav5-1A0A075B5Z7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav5-1A0A075B5Z7 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav5-1A0A075B5Z7 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav5-1A0A075B5Z7 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav5-1A0A075B5Z7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav5-1A0A075B5Z7 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trav5-1A0A075B5Z7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Trav5-1A0A075B5Z7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav5-1A0A075B5Z7 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav5-1A0A075B5Z7 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.18■□□□□ 0.34
Trav5-1A0A075B5Z7 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.18■□□□□ 0.34
Trav5-1A0A075B5Z7 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav5-1A0A075B5Z7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.18■□□□□ 0.34
Trav5-1A0A075B5Z7 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.18■□□□□ 0.34
Trav5-1A0A075B5Z7 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav5-1A0A075B5Z7 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trav5-1A0A075B5Z7 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trav5-1A0A075B5Z7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.18■□□□□ 0.34
Trav5-1A0A075B5Z7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav5-1A0A075B5Z7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trav5-1A0A075B5Z7 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav5-1A0A075B5Z7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav5-1A0A075B5Z7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav5-1A0A075B5Z7 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav5-1A0A075B5Z7 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.18■□□□□ 0.34
Trav5-1A0A075B5Z7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav5-1A0A075B5Z7 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.18■□□□□ 0.34
Trav5-1A0A075B5Z7 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav5-1A0A075B5Z7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav5-1A0A075B5Z7 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav5-1A0A075B5Z7 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav5-1A0A075B5Z7 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.17■□□□□ 0.34
Trav5-1A0A075B5Z7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav5-1A0A075B5Z7 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav5-1A0A075B5Z7 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.17■□□□□ 0.34
Trav5-1A0A075B5Z7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms