Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim34aQ99PP6 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim34aQ99PP6 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim34aQ99PP6 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trim34aQ99PP6 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trim34aQ99PP6 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim34aQ99PP6 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim34aQ99PP6 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim34aQ99PP6 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim34aQ99PP6 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim34aQ99PP6 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim34aQ99PP6 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trim34aQ99PP6 Gm5801-201ENSMUST00000182247 780 ntBASIC13.3□□□□□ -0.28
Trim34aQ99PP6 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC13.3□□□□□ -0.28
Trim34aQ99PP6 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC13.3□□□□□ -0.28
Trim34aQ99PP6 Gm8796-201ENSMUST00000219122 936 ntBASIC13.3□□□□□ -0.28
Trim34aQ99PP6 AC107711.4-201ENSMUST00000228948 440 ntBASIC13.3□□□□□ -0.28
Trim34aQ99PP6 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trim34aQ99PP6 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC13.3□□□□□ -0.28
Trim34aQ99PP6 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim34aQ99PP6 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim34aQ99PP6 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim34aQ99PP6 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim34aQ99PP6 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim34aQ99PP6 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim34aQ99PP6 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim34aQ99PP6 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim34aQ99PP6 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim34aQ99PP6 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim34aQ99PP6 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trim34aQ99PP6 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim34aQ99PP6 Gm13104-201ENSMUST00000119651 1446 ntBASIC13.3□□□□□ -0.28
Trim34aQ99PP6 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim34aQ99PP6 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim34aQ99PP6 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim34aQ99PP6 Gm6768-201ENSMUST00000022467 1878 ntBASIC13.29□□□□□ -0.28
Trim34aQ99PP6 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim34aQ99PP6 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim34aQ99PP6 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC13.29□□□□□ -0.28
Trim34aQ99PP6 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim34aQ99PP6 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim34aQ99PP6 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim34aQ99PP6 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim34aQ99PP6 Gm6755-201ENSMUST00000100598 864 ntBASIC13.29□□□□□ -0.28
Trim34aQ99PP6 Gm6740-201ENSMUST00000100617 864 ntBASIC13.29□□□□□ -0.28
Trim34aQ99PP6 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim34aQ99PP6 Gm13426-201ENSMUST00000117887 795 ntBASIC13.29□□□□□ -0.28
Trim34aQ99PP6 Gm15746-201ENSMUST00000120684 1027 ntBASIC13.29□□□□□ -0.28
Trim34aQ99PP6 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim34aQ99PP6 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim34aQ99PP6 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim34aQ99PP6 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim34aQ99PP6 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC13.29□□□□□ -0.28
Trim34aQ99PP6 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim34aQ99PP6 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim34aQ99PP6 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC13.29□□□□□ -0.28
Trim34aQ99PP6 AC118639.1-202ENSMUST00000226957 653 ntBASIC13.29□□□□□ -0.28
Trim34aQ99PP6 AC102523.1-201ENSMUST00000228706 1144 ntBASIC13.29□□□□□ -0.28
Trim34aQ99PP6 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim34aQ99PP6 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim34aQ99PP6 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim34aQ99PP6 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim34aQ99PP6 Gm13169-201ENSMUST00000122090 1459 ntBASIC13.29□□□□□ -0.28
Trim34aQ99PP6 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim34aQ99PP6 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim34aQ99PP6 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim34aQ99PP6 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim34aQ99PP6 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim34aQ99PP6 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim34aQ99PP6 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim34aQ99PP6 Gm10537-201ENSMUST00000192625 1698 ntBASIC13.28□□□□□ -0.28
Trim34aQ99PP6 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim34aQ99PP6 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim34aQ99PP6 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim34aQ99PP6 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim34aQ99PP6 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trim34aQ99PP6 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim34aQ99PP6 Gm14231-201ENSMUST00000120090 592 ntBASIC13.28□□□□□ -0.28
Trim34aQ99PP6 Gm11544-201ENSMUST00000120215 382 ntBASIC13.28□□□□□ -0.28
Trim34aQ99PP6 Gm15815-201ENSMUST00000120569 255 ntBASIC13.28□□□□□ -0.28
Trim34aQ99PP6 Gm7805-201ENSMUST00000154348 448 ntBASIC13.28□□□□□ -0.28
Trim34aQ99PP6 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC13.28□□□□□ -0.28
Trim34aQ99PP6 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim34aQ99PP6 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim34aQ99PP6 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trim34aQ99PP6 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim34aQ99PP6 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trim34aQ99PP6 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim34aQ99PP6 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim34aQ99PP6 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trim34aQ99PP6 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim34aQ99PP6 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim34aQ99PP6 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim34aQ99PP6 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trim34aQ99PP6 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim34aQ99PP6 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Trim34aQ99PP6 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim34aQ99PP6 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim34aQ99PP6 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trim34aQ99PP6 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms