Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Scrt1Q99M85 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Scrt1Q99M85 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC9.53□□□□□ -0.88
Scrt1Q99M85 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC9.53□□□□□ -0.88
Scrt1Q99M85 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Scrt1Q99M85 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Scrt1Q99M85 Gm42463-201ENSMUST00000198041 4886 ntBASIC9.53□□□□□ -0.88
Scrt1Q99M85 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Scrt1Q99M85 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Scrt1Q99M85 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Scrt1Q99M85 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Scrt1Q99M85 AC154354.1-203ENSMUST00000225565 1364 ntBASIC9.52□□□□□ -0.88
Scrt1Q99M85 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Scrt1Q99M85 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Gm9035-201ENSMUST00000218318 1697 ntBASIC9.52□□□□□ -0.89
Scrt1Q99M85 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Gm1826-201ENSMUST00000118646 1162 ntBASIC9.52□□□□□ -0.89
Scrt1Q99M85 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Gm26875-201ENSMUST00000181006 950 ntBASIC9.52□□□□□ -0.89
Scrt1Q99M85 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Ighv5-8-202ENSMUST00000191967 337 ntBASIC9.52□□□□□ -0.89
Scrt1Q99M85 Gm37851-201ENSMUST00000193871 889 ntBASIC9.52□□□□□ -0.89
Scrt1Q99M85 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Scrt1Q99M85 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Gm43460-201ENSMUST00000202491 1057 ntBASIC9.52□□□□□ -0.89
Scrt1Q99M85 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Scrt1Q99M85 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Gm5178-201ENSMUST00000219380 898 ntBASIC9.52□□□□□ -0.89
Scrt1Q99M85 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Nudt13-207ENSMUST00000224311 1574 ntBASIC9.52□□□□□ -0.89
Scrt1Q99M85 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Scrt1Q99M85 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Scrt1Q99M85 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Gm28693-201ENSMUST00000189622 2638 ntBASIC9.51□□□□□ -0.89
Scrt1Q99M85 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Scrt1Q99M85 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Gm14740-201ENSMUST00000118538 1150 ntBASIC9.51□□□□□ -0.89
Scrt1Q99M85 Gm6758-201ENSMUST00000119643 1055 ntBASIC9.51□□□□□ -0.89
Scrt1Q99M85 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Gm36982-201ENSMUST00000193796 1128 ntBASIC9.51□□□□□ -0.89
Scrt1Q99M85 Gm19918-201ENSMUST00000194858 400 ntBASIC9.51□□□□□ -0.89
Scrt1Q99M85 Gm30055-201ENSMUST00000203175 803 ntBASIC9.51□□□□□ -0.89
Scrt1Q99M85 AC187103.3-201ENSMUST00000225725 646 ntBASIC9.51□□□□□ -0.89
Scrt1Q99M85 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Gm9244-201ENSMUST00000056767 2129 ntBASIC9.51□□□□□ -0.89
Scrt1Q99M85 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms