Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RtcbQ99LF4 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Gm28391-201ENSMUST00000185202 379 ntBASIC13.32□□□□□ -0.28
RtcbQ99LF4 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Gm29528-201ENSMUST00000186699 379 ntBASIC13.32□□□□□ -0.28
RtcbQ99LF4 Gm29526-201ENSMUST00000187217 379 ntBASIC13.32□□□□□ -0.28
RtcbQ99LF4 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Gm28179-201ENSMUST00000188365 613 ntBASIC13.32□□□□□ -0.28
RtcbQ99LF4 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Gm6859-201ENSMUST00000218614 989 ntBASIC13.32□□□□□ -0.28
RtcbQ99LF4 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
RtcbQ99LF4 AC159006.3-201ENSMUST00000226918 664 ntBASIC13.32□□□□□ -0.28
RtcbQ99LF4 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Gm7964-201ENSMUST00000051522 1378 ntBASIC13.32□□□□□ -0.28
RtcbQ99LF4 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Gm43482-201ENSMUST00000202797 1861 ntBASIC13.31□□□□□ -0.28
RtcbQ99LF4 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Gm24470-201ENSMUST00000104486 132 ntBASIC13.31□□□□□ -0.28
RtcbQ99LF4 Mrps33-202ENSMUST00000114797 500 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Gm7781-201ENSMUST00000117258 788 ntBASIC13.31□□□□□ -0.28
RtcbQ99LF4 Gm9095-201ENSMUST00000117607 881 ntBASIC13.31□□□□□ -0.28
RtcbQ99LF4 Gm12377-201ENSMUST00000118656 252 ntBASIC13.31□□□□□ -0.28
RtcbQ99LF4 Gm9097-201ENSMUST00000120514 880 ntBASIC13.31□□□□□ -0.28
RtcbQ99LF4 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Gm5766-202ENSMUST00000161633 799 ntBASIC13.31□□□□□ -0.28
RtcbQ99LF4 Gm20474-201ENSMUST00000180089 596 ntBASIC13.31□□□□□ -0.28
RtcbQ99LF4 Gm28916-201ENSMUST00000186988 699 ntBASIC13.31□□□□□ -0.28
RtcbQ99LF4 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Gm29487-201ENSMUST00000190146 256 ntBASIC13.31□□□□□ -0.28
RtcbQ99LF4 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Gm3945-201ENSMUST00000196637 683 ntBASIC13.31□□□□□ -0.28
RtcbQ99LF4 Gm42617-201ENSMUST00000197640 1229 ntBASIC13.31□□□□□ -0.28
RtcbQ99LF4 2010008C14Rik-201ENSMUST00000203956 593 ntBASIC13.31□□□□□ -0.28
RtcbQ99LF4 Gm45308-201ENSMUST00000210610 415 ntBASIC13.31□□□□□ -0.28
RtcbQ99LF4 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Gm26440-201ENSMUST00000082591 129 ntBASIC13.31□□□□□ -0.28
RtcbQ99LF4 Gm8420-201ENSMUST00000097103 598 ntBASIC13.31□□□□□ -0.28
RtcbQ99LF4 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RtcbQ99LF4 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
RtcbQ99LF4 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RtcbQ99LF4 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RtcbQ99LF4 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RtcbQ99LF4 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RtcbQ99LF4 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RtcbQ99LF4 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
RtcbQ99LF4 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
RtcbQ99LF4 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RtcbQ99LF4 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RtcbQ99LF4 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RtcbQ99LF4 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms