Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps53Q8CCB4 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps53Q8CCB4 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps53Q8CCB4 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps53Q8CCB4 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Vps53Q8CCB4 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps53Q8CCB4 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps53Q8CCB4 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps53Q8CCB4 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps53Q8CCB4 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps53Q8CCB4 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps53Q8CCB4 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Vps53Q8CCB4 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Vps53Q8CCB4 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps53Q8CCB4 AC125409.1-201ENSMUST00000223213 3370 ntBASIC12.6□□□□□ -0.39
Vps53Q8CCB4 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps53Q8CCB4 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps53Q8CCB4 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps53Q8CCB4 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps53Q8CCB4 Gm43152-201ENSMUST00000202495 1638 ntBASIC12.6□□□□□ -0.39
Vps53Q8CCB4 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps53Q8CCB4 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC12.6□□□□□ -0.39
Vps53Q8CCB4 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Vps53Q8CCB4 Gm11573-201ENSMUST00000119956 394 ntBASIC12.6□□□□□ -0.39
Vps53Q8CCB4 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC12.6□□□□□ -0.39
Vps53Q8CCB4 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps53Q8CCB4 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps53Q8CCB4 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps53Q8CCB4 Gm24992-201ENSMUST00000157412 130 ntBASIC12.6□□□□□ -0.39
Vps53Q8CCB4 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Vps53Q8CCB4 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Vps53Q8CCB4 Gm9507-202ENSMUST00000180157 654 ntBASIC12.6□□□□□ -0.39
Vps53Q8CCB4 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC12.6□□□□□ -0.39
Vps53Q8CCB4 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Vps53Q8CCB4 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC12.6□□□□□ -0.39
Vps53Q8CCB4 Saa-ps-201ENSMUST00000211148 320 ntBASIC12.6□□□□□ -0.39
Vps53Q8CCB4 AC153962.2-201ENSMUST00000219417 550 ntBASIC12.6□□□□□ -0.39
Vps53Q8CCB4 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC12.6□□□□□ -0.39
Vps53Q8CCB4 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps53Q8CCB4 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps53Q8CCB4 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.6□□□□□ -0.39
Vps53Q8CCB4 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps53Q8CCB4 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Vps53Q8CCB4 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC12.6□□□□□ -0.39
Vps53Q8CCB4 Gm6124-201ENSMUST00000188240 2580 ntBASIC12.6□□□□□ -0.39
Vps53Q8CCB4 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Vps53Q8CCB4 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps53Q8CCB4 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps53Q8CCB4 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps53Q8CCB4 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps53Q8CCB4 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps53Q8CCB4 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Vps53Q8CCB4 AC124732.3-201ENSMUST00000221835 1765 ntBASIC12.59□□□□□ -0.39
Vps53Q8CCB4 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps53Q8CCB4 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps53Q8CCB4 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Vps53Q8CCB4 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC12.59□□□□□ -0.39
Vps53Q8CCB4 Gm14234-201ENSMUST00000119539 845 ntBASIC12.59□□□□□ -0.39
Vps53Q8CCB4 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps53Q8CCB4 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC12.59□□□□□ -0.39
Vps53Q8CCB4 Gm24809-201ENSMUST00000175318 271 ntBASIC12.59□□□□□ -0.39
Vps53Q8CCB4 Gm5700-201ENSMUST00000191483 989 ntBASIC12.59□□□□□ -0.39
Vps53Q8CCB4 BC106175-202ENSMUST00000219344 1213 ntBASIC12.59□□□□□ -0.39
Vps53Q8CCB4 CT030166.5-201ENSMUST00000222249 420 ntBASIC12.59□□□□□ -0.39
Vps53Q8CCB4 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Vps53Q8CCB4 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Vps53Q8CCB4 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Vps53Q8CCB4 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps53Q8CCB4 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps53Q8CCB4 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps53Q8CCB4 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC12.59□□□□□ -0.39
Vps53Q8CCB4 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps53Q8CCB4 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps53Q8CCB4 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps53Q8CCB4 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Vps53Q8CCB4 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps53Q8CCB4 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC12.59□□□□□ -0.39
Vps53Q8CCB4 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Vps53Q8CCB4 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps53Q8CCB4 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Vps53Q8CCB4 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Vps53Q8CCB4 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps53Q8CCB4 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Vps53Q8CCB4 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC12.58□□□□□ -0.39
Vps53Q8CCB4 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Vps53Q8CCB4 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Vps53Q8CCB4 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Vps53Q8CCB4 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Vps53Q8CCB4 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps53Q8CCB4 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Vps53Q8CCB4 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Vps53Q8CCB4 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps53Q8CCB4 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps53Q8CCB4 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps53Q8CCB4 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps53Q8CCB4 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps53Q8CCB4 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC12.58□□□□□ -0.4
Vps53Q8CCB4 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps53Q8CCB4 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps53Q8CCB4 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms