Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Gm12912-201ENSMUST00000121596 1381 ntBASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Gm5641-201ENSMUST00000091130 1488 ntBASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Gm43625-201ENSMUST00000199177 1539 ntBASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Gm14006-201ENSMUST00000122132 981 ntBASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Gm9162-201ENSMUST00000182081 991 ntBASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Gm8022-201ENSMUST00000191763 904 ntBASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Gm18706-201ENSMUST00000210053 1066 ntBASIC12.54□□□□□ -0.4
Alx1Q8C8B0 BC106175-202ENSMUST00000219344 1213 ntBASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 CT030195.2-201ENSMUST00000226074 1286 ntBASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Gm5449-201ENSMUST00000081132 357 ntBASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Gm5472-201ENSMUST00000178604 1678 ntBASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Gm12716-201ENSMUST00000120606 1354 ntBASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Alx1Q8C8B0 Gm37954-201ENSMUST00000195400 2071 ntBASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Gm12489-201ENSMUST00000119364 148 ntBASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Gm11502-201ENSMUST00000120917 1211 ntBASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Gm5526-201ENSMUST00000153604 423 ntBASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Gm18201-201ENSMUST00000174735 875 ntBASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC12.53□□□□□ -0.4
Alx1Q8C8B0 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC12.53□□□□□ -0.4
Alx1Q8C8B0 AC162932.1-201ENSMUST00000219209 872 ntBASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Alx1Q8C8B0 Gm15604-201ENSMUST00000118350 1456 ntBASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms