Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Gm10731-201ENSMUST00000181171 448 ntBASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Gm4895-201ENSMUST00000181646 1137 ntBASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Gm42780-201ENSMUST00000197083 734 ntBASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Gm4797-201ENSMUST00000219075 1283 ntBASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 AC124561.1-202ENSMUST00000228652 1929 ntBASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Gm13019-201ENSMUST00000120000 276 ntBASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Gm14585-201ENSMUST00000120713 634 ntBASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Gm9369-201ENSMUST00000196009 733 ntBASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Gm44980-201ENSMUST00000205826 314 ntBASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 AC158636.1-201ENSMUST00000220118 1393 ntBASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Gm37567-201ENSMUST00000193241 2279 ntBASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rad54bQ6PFE3 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
Rad54bQ6PFE3 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Gm15236-201ENSMUST00000117309 379 ntBASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Gm19013-201ENSMUST00000183895 1222 ntBASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Gm19014-201ENSMUST00000184828 1189 ntBASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Gm38313-201ENSMUST00000191953 1266 ntBASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Gm42710-201ENSMUST00000200608 985 ntBASIC10.83□□□□□ -0.68
Rad54bQ6PFE3 Gm43811-201ENSMUST00000202862 695 ntBASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms