Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Gm9164-201ENSMUST00000118700 1014 ntBASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Gm12136-201ENSMUST00000120460 1209 ntBASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Fam187b-202ENSMUST00000128384 1244 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Gm16548-201ENSMUST00000133341 1226 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Gm11493-201ENSMUST00000134567 566 ntTSL 3 BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Anp32e-207ENSMUST00000170125 413 ntTSL 3 BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Tdrkh-203ENSMUST00000196386 1050 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Gm18646-201ENSMUST00000212240 1063 ntBASIC9.92□□□□□ -0.82
Spg11Q3UHA3 CT033781.3-201ENSMUST00000221886 504 ntTSL 2 BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Cdca8-201ENSMUST00000030690 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Zc3h7a-201ENSMUST00000037633 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Olfr96-201ENSMUST00000078209 1051 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 H2al1j-201ENSMUST00000091180 330 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Cd1d2-203ENSMUST00000194208 1527 ntAPPRIS P5 TSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Gm43972-201ENSMUST00000181398 1467 ntBASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 4933427I22Rik-202ENSMUST00000153921 1378 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Gm38346-201ENSMUST00000192379 2639 ntBASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Lyrm1-204ENSMUST00000106518 875 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Tmsb15a-202ENSMUST00000113154 544 ntTSL 5 BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Gm14138-201ENSMUST00000122061 745 ntBASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Gm22987-201ENSMUST00000122757 246 ntBASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Gm29164-201ENSMUST00000185454 1024 ntBASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Gm29372-201ENSMUST00000191416 364 ntBASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Gm42915-201ENSMUST00000197478 323 ntBASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Gm19566-201ENSMUST00000199576 610 ntBASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Pttg1-201ENSMUST00000020685 634 ntTSL 2 BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Gm8171-201ENSMUST00000217443 720 ntBASIC9.91□□□□□ -0.82
Spg11Q3UHA3 AC154760.1-201ENSMUST00000227218 673 ntBASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Gm8991-201ENSMUST00000073014 1075 ntBASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Aqp8-202ENSMUST00000098056 1451 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 H2-M10.4-201ENSMUST00000057502 1410 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Olfr400-ps1-201ENSMUST00000118094 955 ntBASIC9.91□□□□□ -0.82
Spg11Q3UHA3 1700056N10Rik-201ENSMUST00000141875 1043 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Gm11827-201ENSMUST00000142297 1257 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Gm21054-201ENSMUST00000203981 380 ntBASIC9.91□□□□□ -0.82
Spg11Q3UHA3 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 AC118704.1-201ENSMUST00000225022 695 ntBASIC9.91□□□□□ -0.82
Spg11Q3UHA3 AC242269.1-201ENSMUST00000227020 741 ntBASIC9.91□□□□□ -0.82
Spg11Q3UHA3 AC130219.2-201ENSMUST00000228765 807 ntBASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Myl10-201ENSMUST00000005611 688 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Gm22982-201ENSMUST00000082613 319 ntBASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC9.91□□□□□ -0.82
Spg11Q3UHA3 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Spg11Q3UHA3 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Spg11Q3UHA3 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Spg11Q3UHA3 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Spg11Q3UHA3 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.82
Spg11Q3UHA3 Galntl5-202ENSMUST00000114965 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Spg11Q3UHA3 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Spg11Q3UHA3 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Spg11Q3UHA3 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.82
Spg11Q3UHA3 Tes-201ENSMUST00000076654 2685 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Spg11Q3UHA3 Ccdc120-201ENSMUST00000033490 3658 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Spg11Q3UHA3 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Spg11Q3UHA3 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms