Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Npas1P97459 Gm10807-201ENSMUST00000177134 795 ntBASIC9.02□□□□□ -0.97
Npas1P97459 Fkbp5-206ENSMUST00000177939 3844 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Npas1P97459 Mir7677-201ENSMUST00000184226 67 ntBASIC9.02□□□□□ -0.97
Npas1P97459 Gm7003-201ENSMUST00000195089 312 ntBASIC9.02□□□□□ -0.97
Npas1P97459 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC9.02□□□□□ -0.97
Npas1P97459 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
Npas1P97459 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Npas1P97459 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC9.02□□□□□ -0.97
Npas1P97459 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC9.02□□□□□ -0.97
Npas1P97459 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Npas1P97459 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC9.02□□□□□ -0.97
Npas1P97459 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Npas1P97459 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Npas1P97459 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Npas1P97459 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Npas1P97459 Atp2b2-202ENSMUST00000101044 4586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Npas1P97459 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC9.02□□□□□ -0.97
Npas1P97459 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Npas1P97459 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Npas1P97459 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Npas1P97459 Gm42488-201ENSMUST00000197648 3225 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Npas1P97459 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Npas1P97459 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Npas1P97459 Gm45746-201ENSMUST00000212623 2447 ntBASIC9.02□□□□□ -0.97
Npas1P97459 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Npas1P97459 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Npas1P97459 Slco5a1-206ENSMUST00000147606 3615 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 Zfp958-202ENSMUST00000202692 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 Hnrnpc-201ENSMUST00000111610 2847 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 Pde1c-204ENSMUST00000164752 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 Tubd1-205ENSMUST00000167178 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 Gm23061-201ENSMUST00000102348 116 ntBASIC9.01□□□□□ -0.97
Npas1P97459 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 Rimbp2-201ENSMUST00000111346 4264 ntAPPRIS P3 TSL 5 BASIC9.01□□□□□ -0.97
Npas1P97459 Gm12579-201ENSMUST00000118040 783 ntBASIC9.01□□□□□ -0.97
Npas1P97459 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC9.01□□□□□ -0.97
Npas1P97459 Gm13996-201ENSMUST00000118456 430 ntBASIC9.01□□□□□ -0.97
Npas1P97459 Tspan2-202ENSMUST00000119902 961 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 Gm8566-201ENSMUST00000120174 465 ntBASIC9.01□□□□□ -0.97
Npas1P97459 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC9.01□□□□□ -0.97
Npas1P97459 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC9.01□□□□□ -0.97
Npas1P97459 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Npas1P97459 Gm8815-201ENSMUST00000173809 620 ntBASIC9.01□□□□□ -0.97
Npas1P97459 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Npas1P97459 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC9.01□□□□□ -0.97
Npas1P97459 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 Gm38341-201ENSMUST00000195357 515 ntBASIC9.01□□□□□ -0.97
Npas1P97459 Gm43758-201ENSMUST00000199500 367 ntBASIC9.01□□□□□ -0.97
Npas1P97459 Gm7118-201ENSMUST00000200167 1003 ntBASIC9.01□□□□□ -0.97
Npas1P97459 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 Gm17825-201ENSMUST00000206836 794 ntBASIC9.01□□□□□ -0.97
Npas1P97459 Gm45867-201ENSMUST00000208201 2317 ntBASIC9.01□□□□□ -0.97
Npas1P97459 Gm45856-201ENSMUST00000212752 416 ntBASIC9.01□□□□□ -0.97
Npas1P97459 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC9.01□□□□□ -0.97
Npas1P97459 AC151275.1-201ENSMUST00000224870 585 ntBASIC9.01□□□□□ -0.97
Npas1P97459 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC9.01□□□□□ -0.97
Npas1P97459 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Npas1P97459 Sfi1-201ENSMUST00000066391 3898 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Npas1P97459 Parp3-201ENSMUST00000067218 2962 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 Mbd1-201ENSMUST00000097530 2833 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 1700126A01Rik-201ENSMUST00000185283 2061 ntBASIC9.01□□□□□ -0.97
Npas1P97459 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Npas1P97459 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC9.01□□□□□ -0.97
Npas1P97459 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 Ctnna2-201ENSMUST00000075340 2864 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Npas1P97459 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 Casq2-201ENSMUST00000029454 2556 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 Gm42833-201ENSMUST00000196019 2124 ntBASIC9.01□□□□□ -0.97
Npas1P97459 Lrtm1-203ENSMUST00000224760 3060 ntBASIC9.01□□□□□ -0.97
Npas1P97459 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 Mpo-201ENSMUST00000020779 2750 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Npas1P97459 Sh3tc1-207ENSMUST00000201511 4246 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Npas1P97459 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
Npas1P97459 Hspd1-ps4-201ENSMUST00000121815 1668 ntBASIC9□□□□□ -0.97
Npas1P97459 Syncrip-207ENSMUST00000174269 3286 ntTSL 5 BASIC9□□□□□ -0.97
Npas1P97459 Dcc-201ENSMUST00000073379 4855 ntTSL 5 BASIC9□□□□□ -0.97
Npas1P97459 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC9□□□□□ -0.97
Npas1P97459 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC9□□□□□ -0.97
Npas1P97459 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms