Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-3P97334 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-3P97334 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Nkx2-3P97334 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-3P97334 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-3P97334 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-3P97334 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-3P97334 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-3P97334 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-3P97334 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-3P97334 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Nkx2-3P97334 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Nkx2-3P97334 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.54□□□□□ -0.24
Nkx2-3P97334 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-3P97334 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-3P97334 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC13.54□□□□□ -0.24
Nkx2-3P97334 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC13.54□□□□□ -0.24
Nkx2-3P97334 Gm27826-201ENSMUST00000175282 255 ntBASIC13.54□□□□□ -0.24
Nkx2-3P97334 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC13.54□□□□□ -0.24
Nkx2-3P97334 Uba52-ps-201ENSMUST00000183770 379 ntBASIC13.54□□□□□ -0.24
Nkx2-3P97334 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC13.54□□□□□ -0.24
Nkx2-3P97334 Gm43726-201ENSMUST00000199110 775 ntBASIC13.54□□□□□ -0.24
Nkx2-3P97334 Gm7319-201ENSMUST00000210047 778 ntBASIC13.54□□□□□ -0.24
Nkx2-3P97334 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC13.54□□□□□ -0.24
Nkx2-3P97334 AC107711.3-201ENSMUST00000228939 1035 ntBASIC13.54□□□□□ -0.24
Nkx2-3P97334 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-3P97334 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-3P97334 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-3P97334 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Nkx2-3P97334 Mir194-2-201ENSMUST00000083648 86 ntBASIC13.54□□□□□ -0.24
Nkx2-3P97334 Gm2128-201ENSMUST00000108009 2560 ntBASIC13.54□□□□□ -0.24
Nkx2-3P97334 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC13.54□□□□□ -0.24
Nkx2-3P97334 Gm45076-201ENSMUST00000207517 1517 ntTSL 5 BASIC13.54□□□□□ -0.24
Nkx2-3P97334 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-3P97334 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC13.53□□□□□ -0.24
Nkx2-3P97334 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Gm14997-201ENSMUST00000119232 636 ntBASIC13.53□□□□□ -0.24
Nkx2-3P97334 Gm6500-201ENSMUST00000119412 451 ntBASIC13.53□□□□□ -0.24
Nkx2-3P97334 Gm13281-201ENSMUST00000120871 567 ntBASIC13.53□□□□□ -0.24
Nkx2-3P97334 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-3P97334 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Gm29304-201ENSMUST00000186555 695 ntBASIC13.53□□□□□ -0.24
Nkx2-3P97334 Gm29223-201ENSMUST00000188867 695 ntBASIC13.53□□□□□ -0.24
Nkx2-3P97334 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Gm37921-201ENSMUST00000194333 695 ntBASIC13.53□□□□□ -0.24
Nkx2-3P97334 Gm43866-201ENSMUST00000203894 839 ntBASIC13.53□□□□□ -0.24
Nkx2-3P97334 Gm6426-201ENSMUST00000209048 854 ntBASIC13.53□□□□□ -0.24
Nkx2-3P97334 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC13.53□□□□□ -0.24
Nkx2-3P97334 AC127583.1-201ENSMUST00000224351 540 ntBASIC13.53□□□□□ -0.24
Nkx2-3P97334 AC165260.2-201ENSMUST00000225371 395 ntBASIC13.53□□□□□ -0.24
Nkx2-3P97334 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Gm4865-201ENSMUST00000196284 1309 ntBASIC13.53□□□□□ -0.24
Nkx2-3P97334 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Nkx2-3P97334 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC13.52□□□□□ -0.24
Nkx2-3P97334 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx2-3P97334 Gm38055-201ENSMUST00000195353 2217 ntBASIC13.52□□□□□ -0.24
Nkx2-3P97334 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx2-3P97334 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx2-3P97334 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Nkx2-3P97334 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx2-3P97334 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx2-3P97334 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx2-3P97334 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx2-3P97334 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx2-3P97334 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Nkx2-3P97334 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Nkx2-3P97334 Gm13286-201ENSMUST00000117750 537 ntBASIC13.52□□□□□ -0.25
Nkx2-3P97334 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-3P97334 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Nkx2-3P97334 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms