Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SgcbP82349 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcbP82349 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SgcbP82349 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcbP82349 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SgcbP82349 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SgcbP82349 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcbP82349 Gm43482-201ENSMUST00000202797 1861 ntBASIC9.73□□□□□ -0.85
SgcbP82349 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcbP82349 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SgcbP82349 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SgcbP82349 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SgcbP82349 Snord23-201ENSMUST00000116828 109 ntBASIC9.73□□□□□ -0.85
SgcbP82349 Gm13351-201ENSMUST00000118087 414 ntBASIC9.73□□□□□ -0.85
SgcbP82349 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC9.73□□□□□ -0.85
SgcbP82349 Gm12791-201ENSMUST00000120788 655 ntBASIC9.73□□□□□ -0.85
SgcbP82349 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC9.73□□□□□ -0.85
SgcbP82349 Gm25830-201ENSMUST00000158923 132 ntBASIC9.73□□□□□ -0.85
SgcbP82349 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC9.73□□□□□ -0.85
SgcbP82349 Gm28032-201ENSMUST00000184104 96 ntBASIC9.73□□□□□ -0.85
SgcbP82349 Gm29155-201ENSMUST00000185910 269 ntBASIC9.73□□□□□ -0.85
SgcbP82349 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SgcbP82349 Platr10-202ENSMUST00000191479 818 ntBASIC9.73□□□□□ -0.85
SgcbP82349 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SgcbP82349 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SgcbP82349 Gm6423-201ENSMUST00000204315 934 ntBASIC9.73□□□□□ -0.85
SgcbP82349 Gm10297-201ENSMUST00000207136 651 ntBASIC9.73□□□□□ -0.85
SgcbP82349 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC9.73□□□□□ -0.85
SgcbP82349 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC9.73□□□□□ -0.85
SgcbP82349 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
SgcbP82349 Gm25125-201ENSMUST00000083340 136 ntBASIC9.73□□□□□ -0.85
SgcbP82349 Gm5766-201ENSMUST00000160520 1977 ntBASIC9.73□□□□□ -0.85
SgcbP82349 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcbP82349 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcbP82349 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
SgcbP82349 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SgcbP82349 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcbP82349 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SgcbP82349 Tti2-201ENSMUST00000098842 5039 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcbP82349 Olfr410-202ENSMUST00000213831 5070 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
SgcbP82349 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC9.73□□□□□ -0.85
SgcbP82349 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcbP82349 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcbP82349 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcbP82349 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcbP82349 Gm21759-201ENSMUST00000178345 1828 ntBASIC9.72□□□□□ -0.85
SgcbP82349 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcbP82349 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcbP82349 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcbP82349 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcbP82349 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcbP82349 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcbP82349 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
SgcbP82349 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcbP82349 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcbP82349 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SgcbP82349 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcbP82349 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcbP82349 Zfp24-201ENSMUST00000066497 5732 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcbP82349 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcbP82349 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcbP82349 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcbP82349 Tpp2-207ENSMUST00000188313 4631 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcbP82349 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcbP82349 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC9.72□□□□□ -0.85
SgcbP82349 Gm13019-201ENSMUST00000120000 276 ntBASIC9.72□□□□□ -0.85
SgcbP82349 Gm16397-201ENSMUST00000122201 494 ntBASIC9.72□□□□□ -0.85
SgcbP82349 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcbP82349 Gm25843-201ENSMUST00000122582 314 ntBASIC9.72□□□□□ -0.85
SgcbP82349 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SgcbP82349 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcbP82349 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SgcbP82349 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC9.72□□□□□ -0.85
SgcbP82349 Gm23673-201ENSMUST00000157474 298 ntBASIC9.72□□□□□ -0.85
SgcbP82349 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC9.72□□□□□ -0.85
SgcbP82349 Gm5529-201ENSMUST00000165691 891 ntBASIC9.72□□□□□ -0.85
SgcbP82349 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC9.72□□□□□ -0.85
SgcbP82349 Gm19927-201ENSMUST00000185792 781 ntBASIC9.72□□□□□ -0.85
SgcbP82349 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SgcbP82349 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC9.72□□□□□ -0.85
SgcbP82349 Gm28925-201ENSMUST00000188586 168 ntBASIC9.72□□□□□ -0.85
SgcbP82349 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC9.72□□□□□ -0.85
SgcbP82349 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC9.72□□□□□ -0.85
SgcbP82349 Gm10752-201ENSMUST00000218348 729 ntBASIC9.72□□□□□ -0.85
SgcbP82349 Gm18514-201ENSMUST00000218980 436 ntBASIC9.72□□□□□ -0.85
SgcbP82349 Gm18968-201ENSMUST00000221319 862 ntBASIC9.72□□□□□ -0.85
SgcbP82349 AC158392.3-201ENSMUST00000224271 1284 ntBASIC9.72□□□□□ -0.85
SgcbP82349 CT030194.1-201ENSMUST00000225507 532 ntBASIC9.72□□□□□ -0.85
SgcbP82349 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcbP82349 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC9.72□□□□□ -0.85
SgcbP82349 Zfp865-202ENSMUST00000076791 1129 ntBASIC9.72□□□□□ -0.85
SgcbP82349 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
SgcbP82349 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcbP82349 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC9.72□□□□□ -0.85
SgcbP82349 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcbP82349 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SgcbP82349 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
SgcbP82349 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC9.72□□□□□ -0.85
SgcbP82349 Gm19027-201ENSMUST00000187291 1355 ntBASIC9.72□□□□□ -0.85
SgcbP82349 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 109.1 ms