Protein–RNA interactions for Protein: P70388

Rad50, DNA repair protein RAD50, mousemouse

Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad50P70388 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rad50P70388 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.96□□□□□ -0.34
Rad50P70388 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rad50P70388 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rad50P70388 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rad50P70388 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rad50P70388 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.34
Rad50P70388 CT009713.5-203ENSMUST00000224218 2079 ntBASIC12.95□□□□□ -0.34
Rad50P70388 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rad50P70388 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rad50P70388 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rad50P70388 Gm7742-201ENSMUST00000167648 1527 ntBASIC12.95□□□□□ -0.34
Rad50P70388 Gm7732-201ENSMUST00000170486 1527 ntBASIC12.95□□□□□ -0.34
Rad50P70388 Gm7740-201ENSMUST00000186171 1527 ntBASIC12.95□□□□□ -0.34
Rad50P70388 Gm7736-201ENSMUST00000096981 1527 ntBASIC12.95□□□□□ -0.34
Rad50P70388 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Rad50P70388 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC12.95□□□□□ -0.34
Rad50P70388 Gm15003-201ENSMUST00000118884 446 ntBASIC12.95□□□□□ -0.34
Rad50P70388 Gm18201-201ENSMUST00000174735 875 ntBASIC12.95□□□□□ -0.34
Rad50P70388 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rad50P70388 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC12.95□□□□□ -0.34
Rad50P70388 Gm44552-201ENSMUST00000205458 1247 ntBASIC12.95□□□□□ -0.34
Rad50P70388 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC12.95□□□□□ -0.34
Rad50P70388 Gm8162-201ENSMUST00000213951 665 ntBASIC12.95□□□□□ -0.34
Rad50P70388 Gm8255-201ENSMUST00000218693 305 ntBASIC12.95□□□□□ -0.34
Rad50P70388 BX649293.1-201ENSMUST00000227437 631 ntBASIC12.95□□□□□ -0.34
Rad50P70388 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rad50P70388 Gm38312-201ENSMUST00000195426 1746 ntBASIC12.95□□□□□ -0.34
Rad50P70388 AC154220.1-201ENSMUST00000225033 1705 ntBASIC12.95□□□□□ -0.34
Rad50P70388 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Rad50P70388 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rad50P70388 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Rad50P70388 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rad50P70388 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rad50P70388 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Rad50P70388 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rad50P70388 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rad50P70388 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rad50P70388 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rad50P70388 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rad50P70388 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rad50P70388 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
Rad50P70388 Gm45124-201ENSMUST00000206723 2755 ntBASIC12.95□□□□□ -0.34
Rad50P70388 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rad50P70388 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad50P70388 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad50P70388 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rad50P70388 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad50P70388 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rad50P70388 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC12.94□□□□□ -0.34
Rad50P70388 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC12.94□□□□□ -0.34
Rad50P70388 Gm6158-201ENSMUST00000109467 904 ntBASIC12.94□□□□□ -0.34
Rad50P70388 Gm16518-201ENSMUST00000117960 508 ntBASIC12.94□□□□□ -0.34
Rad50P70388 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC12.94□□□□□ -0.34
Rad50P70388 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rad50P70388 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC12.94□□□□□ -0.34
Rad50P70388 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rad50P70388 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC12.94□□□□□ -0.34
Rad50P70388 Gm17070-201ENSMUST00000170463 784 ntBASIC12.94□□□□□ -0.34
Rad50P70388 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC12.94□□□□□ -0.34
Rad50P70388 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rad50P70388 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC12.94□□□□□ -0.34
Rad50P70388 Igkv2-116-201ENSMUST00000199327 362 ntBASIC12.94□□□□□ -0.34
Rad50P70388 Gm44155-201ENSMUST00000203923 412 ntBASIC12.94□□□□□ -0.34
Rad50P70388 Gm31941-201ENSMUST00000209689 350 ntBASIC12.94□□□□□ -0.34
Rad50P70388 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rad50P70388 Gm18035-201ENSMUST00000211962 589 ntBASIC12.94□□□□□ -0.34
Rad50P70388 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad50P70388 Gm9102-201ENSMUST00000219250 465 ntBASIC12.94□□□□□ -0.34
Rad50P70388 Gm26670-202ENSMUST00000226862 340 ntBASIC12.94□□□□□ -0.34
Rad50P70388 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Rad50P70388 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rad50P70388 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad50P70388 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rad50P70388 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad50P70388 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad50P70388 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC12.94□□□□□ -0.34
Rad50P70388 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad50P70388 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rad50P70388 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad50P70388 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC12.94□□□□□ -0.34
Rad50P70388 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC12.94□□□□□ -0.34
Rad50P70388 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad50P70388 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rad50P70388 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad50P70388 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad50P70388 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad50P70388 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad50P70388 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rad50P70388 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad50P70388 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rad50P70388 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad50P70388 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad50P70388 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rad50P70388 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rad50P70388 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rad50P70388 Gm43052-201ENSMUST00000201451 1628 ntBASIC12.93□□□□□ -0.34
Rad50P70388 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rad50P70388 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC12.93□□□□□ -0.34
Rad50P70388 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms