Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm19656-201ENSMUST00000208543 4610 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Lsm3P62311 Rasgrp4-201ENSMUST00000032811 4621 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lsm3P62311 Rasgrp4-202ENSMUST00000094617 4617 ntTSL 5 BASIC9.7□□□□□ -0.86
Lsm3P62311 Csf2rb2-201ENSMUST00000096356 4612 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lsm3P62311 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm3P62311 Zfp948-201ENSMUST00000088787 2612 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm3P62311 Olfm4-203ENSMUST00000228749 2801 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Lsm3P62311 Lrrc28-202ENSMUST00000053950 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm3P62311 Stxbp5l-203ENSMUST00000114780 3476 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Lsm3P62311 Zzef1-208ENSMUST00000207107 11306 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Lsm3P62311 Stk36-202ENSMUST00000087186 4065 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm3P62311 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm3P62311 Adgrl2-208ENSMUST00000197567 5585 ntAPPRIS P2 TSL 2 BASIC9.69□□□□□ -0.86
Lsm3P62311 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm3P62311 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm3P62311 Tcn2-202ENSMUST00000109988 1957 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Lsm3P62311 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Lsm3P62311 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC9.69□□□□□ -0.86
Lsm3P62311 Fgd1-202ENSMUST00000112685 3240 ntTSL 5 BASIC9.69□□□□□ -0.86
Lsm3P62311 Gm14740-201ENSMUST00000118538 1150 ntBASIC9.69□□□□□ -0.86
Lsm3P62311 Gm12490-201ENSMUST00000120255 560 ntBASIC9.69□□□□□ -0.86
Lsm3P62311 Gm15549-201ENSMUST00000121595 622 ntBASIC9.69□□□□□ -0.86
Lsm3P62311 Platr9-202ENSMUST00000149572 1556 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm3P62311 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm3P62311 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm3P62311 Gm5822-201ENSMUST00000161562 1378 ntBASIC9.69□□□□□ -0.86
Lsm3P62311 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm3P62311 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Lsm3P62311 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Lsm3P62311 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm3P62311 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC9.69□□□□□ -0.86
Lsm3P62311 Rpgrip1-213ENSMUST00000181401 3963 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm3P62311 Gm27046-201ENSMUST00000182160 463 ntBASIC9.69□□□□□ -0.86
Lsm3P62311 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm3P62311 Gabrb3-206ENSMUST00000196198 4348 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm3P62311 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC9.69□□□□□ -0.86
Lsm3P62311 Gm44510-201ENSMUST00000206288 4532 ntBASIC9.69□□□□□ -0.86
Lsm3P62311 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm3P62311 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm3P62311 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Lsm3P62311 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm3P62311 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm3P62311 Grpr-201ENSMUST00000033730 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm3P62311 Gulo-201ENSMUST00000059970 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm3P62311 Kir3dl2-201ENSMUST00000072125 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm3P62311 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm3P62311 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm3P62311 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm3P62311 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Lsm3P62311 Cntrl-206ENSMUST00000113037 5970 ntTSL 5 BASIC9.69□□□□□ -0.86
Lsm3P62311 Itgam-207ENSMUST00000098015 4803 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm3P62311 Gm28042-202ENSMUST00000129685 4472 ntAPPRIS P5 TSL 5 BASIC9.69□□□□□ -0.86
Lsm3P62311 Utp14b-202ENSMUST00000151622 3685 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm3P62311 Mov10-207ENSMUST00000168015 3460 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm3P62311 Mov10-201ENSMUST00000002297 3498 ntAPPRIS ALT1 TSL 5 BASIC9.69□□□□□ -0.86
Lsm3P62311 Rel-201ENSMUST00000102864 7466 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Lsm3P62311 Irf4-202ENSMUST00000110307 4761 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Lsm3P62311 Irf4-201ENSMUST00000021784 4764 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Lsm3P62311 Gm45889-202ENSMUST00000211255 2358 ntTSL 5 BASIC9.68□□□□□ -0.86
Lsm3P62311 Olfr243-202ENSMUST00000215723 4735 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Lsm3P62311 Xpo7-201ENSMUST00000022696 4472 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Lsm3P62311 BC017643-202ENSMUST00000106115 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Lsm3P62311 Gm14372-201ENSMUST00000125355 2193 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Lsm3P62311 Gm12381-201ENSMUST00000126314 2186 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Lsm3P62311 Xrcc6-201ENSMUST00000069530 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Lsm3P62311 Slc35b4-201ENSMUST00000019143 6253 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Lsm3P62311 Myo15-202ENSMUST00000081823 7953 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Lsm3P62311 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Lsm3P62311 Hspd1-ps3-201ENSMUST00000119713 1722 ntBASIC9.68□□□□□ -0.86
Lsm3P62311 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Lsm3P62311 March1-206ENSMUST00000110256 3288 ntTSL 5 BASIC9.68□□□□□ -0.86
Lsm3P62311 Sf3b2-201ENSMUST00000025774 3231 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Lsm3P62311 Wdr62-201ENSMUST00000108190 4742 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Lsm3P62311 Wdr24-201ENSMUST00000026833 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Lsm3P62311 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Lsm3P62311 Rnft1-201ENSMUST00000020827 4452 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Lsm3P62311 Atp8b3-201ENSMUST00000020383 4412 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Lsm3P62311 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC9.68□□□□□ -0.86
Lsm3P62311 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Lsm3P62311 Ppip5k1-204ENSMUST00000110627 5494 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Lsm3P62311 Gm12337-201ENSMUST00000119634 400 ntBASIC9.68□□□□□ -0.86
Lsm3P62311 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC9.68□□□□□ -0.86
Lsm3P62311 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Lsm3P62311 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Lsm3P62311 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
Lsm3P62311 Gm7255-201ENSMUST00000187371 908 ntBASIC9.68□□□□□ -0.86
Lsm3P62311 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC9.68□□□□□ -0.86
Lsm3P62311 Rprl1-202ENSMUST00000198476 238 ntBASIC9.68□□□□□ -0.86
Lsm3P62311 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Lsm3P62311 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Lsm3P62311 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC9.68□□□□□ -0.86
Lsm3P62311 Gm18935-201ENSMUST00000212692 664 ntBASIC9.68□□□□□ -0.86
Lsm3P62311 Gm7046-201ENSMUST00000221351 977 ntBASIC9.68□□□□□ -0.86
Lsm3P62311 AC164437.3-201ENSMUST00000228323 347 ntBASIC9.68□□□□□ -0.86
Lsm3P62311 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Lsm3P62311 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC9.68□□□□□ -0.86
Lsm3P62311 Gm29685-201ENSMUST00000219670 2365 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Lsm3P62311 1810041L15Rik-201ENSMUST00000080751 5917 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Lsm3P62311 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Lsm3P62311 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 92.7 ms