Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Lmo4P61969 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Lmo4P61969 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Lmo4P61969 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Lmo4P61969 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Lmo4P61969 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Lmo4P61969 Gm42971-201ENSMUST00000199228 2079 ntBASIC8.71□□□□□ -1.02
Lmo4P61969 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Lmo4P61969 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Lmo4P61969 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Lmo4P61969 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC8.71□□□□□ -1.02
Lmo4P61969 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Lmo4P61969 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Lmo4P61969 Gm6783-201ENSMUST00000120916 1437 ntBASIC8.71□□□□□ -1.02
Lmo4P61969 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Lmo4P61969 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Lmo4P61969 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Lmo4P61969 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC8.7□□□□□ -1.02
Lmo4P61969 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC8.7□□□□□ -1.02
Lmo4P61969 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Lmo4P61969 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Lmo4P61969 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC8.7□□□□□ -1.02
Lmo4P61969 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC8.7□□□□□ -1.02
Lmo4P61969 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC8.7□□□□□ -1.02
Lmo4P61969 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC8.7□□□□□ -1.02
Lmo4P61969 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC8.7□□□□□ -1.02
Lmo4P61969 Gm24078-201ENSMUST00000158184 103 ntBASIC8.7□□□□□ -1.02
Lmo4P61969 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
Lmo4P61969 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC8.7□□□□□ -1.02
Lmo4P61969 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Gm17796-201ENSMUST00000189015 1213 ntBASIC8.7□□□□□ -1.02
Lmo4P61969 Gm5543-201ENSMUST00000193329 1091 ntBASIC8.7□□□□□ -1.02
Lmo4P61969 Gm37301-201ENSMUST00000195412 568 ntBASIC8.7□□□□□ -1.02
Lmo4P61969 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC8.7□□□□□ -1.02
Lmo4P61969 Gm44155-201ENSMUST00000203923 412 ntBASIC8.7□□□□□ -1.02
Lmo4P61969 Gm5881-201ENSMUST00000204737 367 ntBASIC8.7□□□□□ -1.02
Lmo4P61969 AC241616.1-201ENSMUST00000213741 166 ntBASIC8.7□□□□□ -1.02
Lmo4P61969 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Lmo4P61969 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC8.7□□□□□ -1.02
Lmo4P61969 AC154759.1-201ENSMUST00000224137 1159 ntBASIC8.7□□□□□ -1.02
Lmo4P61969 AC141884.2-201ENSMUST00000228811 775 ntBASIC8.7□□□□□ -1.02
Lmo4P61969 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Gm8894-201ENSMUST00000074642 666 ntBASIC8.7□□□□□ -1.02
Lmo4P61969 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Lmo4P61969 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Lmo4P61969 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Gm38111-201ENSMUST00000194817 2741 ntBASIC8.7□□□□□ -1.02
Lmo4P61969 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 AC154354.1-203ENSMUST00000225565 1364 ntBASIC8.7□□□□□ -1.02
Lmo4P61969 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Lmo4P61969 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Lmo4P61969 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Lmo4P61969 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
Lmo4P61969 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Lmo4P61969 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Lmo4P61969 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC8.69□□□□□ -1.02
Lmo4P61969 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Lmo4P61969 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Lmo4P61969 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Lmo4P61969 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
Lmo4P61969 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Lmo4P61969 Gm37697-201ENSMUST00000195680 1844 ntBASIC8.69□□□□□ -1.02
Lmo4P61969 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Lmo4P61969 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Lmo4P61969 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Lmo4P61969 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
Lmo4P61969 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms