Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps33bP59016 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps33bP59016 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps33bP59016 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps33bP59016 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps33bP59016 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Vps33bP59016 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps33bP59016 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Vps33bP59016 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC13.52□□□□□ -0.25
Vps33bP59016 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC13.52□□□□□ -0.25
Vps33bP59016 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Vps33bP59016 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps33bP59016 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps33bP59016 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Vps33bP59016 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps33bP59016 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps33bP59016 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps33bP59016 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps33bP59016 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps33bP59016 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps33bP59016 Nbdy-204ENSMUST00000185492 1346 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps33bP59016 Gm25723-201ENSMUST00000104530 126 ntBASIC13.51□□□□□ -0.25
Vps33bP59016 Rhox3f-201ENSMUST00000115172 833 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps33bP59016 6330418K02Rik-202ENSMUST00000125662 1267 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps33bP59016 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC13.51□□□□□ -0.25
Vps33bP59016 1700028P15Rik-203ENSMUST00000151904 519 ntTSL 3 BASIC13.51□□□□□ -0.25
Vps33bP59016 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC13.51□□□□□ -0.25
Vps33bP59016 Rhox3f-203ENSMUST00000184451 1008 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Vps33bP59016 Ighv1-8-201ENSMUST00000192236 293 ntBASIC13.51□□□□□ -0.25
Vps33bP59016 Gm44155-201ENSMUST00000203923 412 ntBASIC13.51□□□□□ -0.25
Vps33bP59016 Nmb-201ENSMUST00000026817 705 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps33bP59016 Fdps-201ENSMUST00000081848 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps33bP59016 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Vps33bP59016 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps33bP59016 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps33bP59016 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps33bP59016 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Vps33bP59016 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps33bP59016 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Vps33bP59016 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps33bP59016 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps33bP59016 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Vps33bP59016 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps33bP59016 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps33bP59016 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC13.5□□□□□ -0.25
Vps33bP59016 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps33bP59016 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps33bP59016 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.5□□□□□ -0.25
Vps33bP59016 1700092E19Rik-202ENSMUST00000154703 1650 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps33bP59016 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps33bP59016 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps33bP59016 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps33bP59016 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Vps33bP59016 Gm16214-201ENSMUST00000143710 1388 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps33bP59016 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps33bP59016 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps33bP59016 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps33bP59016 Krtap29-1-201ENSMUST00000105051 1029 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Vps33bP59016 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC13.5□□□□□ -0.25
Vps33bP59016 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps33bP59016 Gm12679-201ENSMUST00000123899 636 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps33bP59016 Gm16131-201ENSMUST00000131007 659 ntTSL 3 BASIC13.5□□□□□ -0.25
Vps33bP59016 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC13.5□□□□□ -0.25
Vps33bP59016 Gm6970-201ENSMUST00000169692 666 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Vps33bP59016 Ppp1r2-ps1-201ENSMUST00000178232 621 ntBASIC13.5□□□□□ -0.25
Vps33bP59016 Ppp1r2-ps6-201ENSMUST00000179333 621 ntBASIC13.5□□□□□ -0.25
Vps33bP59016 Gm34780-201ENSMUST00000193896 949 ntBASIC13.5□□□□□ -0.25
Vps33bP59016 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps33bP59016 Gm45225-201ENSMUST00000206852 1139 ntBASIC13.5□□□□□ -0.25
Vps33bP59016 Gm44658-201ENSMUST00000207965 637 ntBASIC13.5□□□□□ -0.25
Vps33bP59016 Cox7a1-202ENSMUST00000208441 485 ntTSL 2 BASIC13.5□□□□□ -0.25
Vps33bP59016 AC123698.1-201ENSMUST00000227090 402 ntBASIC13.5□□□□□ -0.25
Vps33bP59016 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps33bP59016 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps33bP59016 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps33bP59016 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps33bP59016 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps33bP59016 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps33bP59016 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps33bP59016 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps33bP59016 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.5□□□□□ -0.25
Vps33bP59016 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps33bP59016 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps33bP59016 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vps33bP59016 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps33bP59016 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps33bP59016 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Vps33bP59016 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vps33bP59016 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps33bP59016 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.49□□□□□ -0.25
Vps33bP59016 Fmo3-201ENSMUST00000028010 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps33bP59016 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Vps33bP59016 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC13.49□□□□□ -0.25
Vps33bP59016 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Vps33bP59016 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps33bP59016 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps33bP59016 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vps33bP59016 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps33bP59016 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vps33bP59016 Rsl24d1-203ENSMUST00000165177 597 ntTSL 3 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms