Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Atxn1P54254 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Atxn1P54254 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Atxn1P54254 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Atxn1P54254 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Atxn1P54254 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Atxn1P54254 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Atxn1P54254 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Atxn1P54254 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.79□□□□□ -0.68
Atxn1P54254 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Atxn1P54254 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Atxn1P54254 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Atxn1P54254 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC10.79□□□□□ -0.68
Atxn1P54254 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Atxn1P54254 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.79□□□□□ -0.68
Atxn1P54254 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Atxn1P54254 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Atxn1P54254 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC10.79□□□□□ -0.68
Atxn1P54254 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Atxn1P54254 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Atxn1P54254 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Atxn1P54254 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Atxn1P54254 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Atxn1P54254 Gm11473-201ENSMUST00000118980 359 ntBASIC10.79□□□□□ -0.68
Atxn1P54254 Gm15636-201ENSMUST00000119205 668 ntBASIC10.79□□□□□ -0.68
Atxn1P54254 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Atxn1P54254 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Atxn1P54254 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Atxn1P54254 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Atxn1P54254 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Atxn1P54254 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC10.79□□□□□ -0.68
Atxn1P54254 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC10.79□□□□□ -0.68
Atxn1P54254 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC10.79□□□□□ -0.68
Atxn1P54254 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Atxn1P54254 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Atxn1P54254 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Atxn1P54254 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Atxn1P54254 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Atxn1P54254 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Atxn1P54254 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Atxn1P54254 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Atxn1P54254 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Atxn1P54254 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Atxn1P54254 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Atxn1P54254 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Atxn1P54254 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Atxn1P54254 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Atxn1P54254 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.79□□□□□ -0.68
Atxn1P54254 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Atxn1P54254 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
Atxn1P54254 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Atxn1P54254 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Atxn1P54254 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Atxn1P54254 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Atxn1P54254 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Atxn1P54254 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Atxn1P54254 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Atxn1P54254 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.78□□□□□ -0.68
Atxn1P54254 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Atxn1P54254 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Atxn1P54254 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.78□□□□□ -0.68
Atxn1P54254 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Atxn1P54254 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Atxn1P54254 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Atxn1P54254 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Atxn1P54254 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Atxn1P54254 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Atxn1P54254 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Atxn1P54254 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Atxn1P54254 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Atxn1P54254 Gm23062-201ENSMUST00000102349 110 ntBASIC10.78□□□□□ -0.68
Atxn1P54254 Gm12028-201ENSMUST00000118065 436 ntBASIC10.78□□□□□ -0.68
Atxn1P54254 Gm3828-201ENSMUST00000121817 257 ntBASIC10.78□□□□□ -0.68
Atxn1P54254 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC10.78□□□□□ -0.68
Atxn1P54254 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Atxn1P54254 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC10.78□□□□□ -0.68
Atxn1P54254 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Atxn1P54254 Mir1941-201ENSMUST00000157834 83 ntBASIC10.78□□□□□ -0.68
Atxn1P54254 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Atxn1P54254 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Atxn1P54254 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Atxn1P54254 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Atxn1P54254 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Atxn1P54254 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Atxn1P54254 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Atxn1P54254 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC10.78□□□□□ -0.68
Atxn1P54254 Gm44908-201ENSMUST00000208610 266 ntBASIC10.78□□□□□ -0.68
Atxn1P54254 AC140314.1-201ENSMUST00000219549 554 ntBASIC10.78□□□□□ -0.68
Atxn1P54254 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Atxn1P54254 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Atxn1P54254 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Atxn1P54254 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Atxn1P54254 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Atxn1P54254 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC10.78□□□□□ -0.68
Atxn1P54254 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Atxn1P54254 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Atxn1P54254 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Atxn1P54254 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC10.78□□□□□ -0.68
Atxn1P54254 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Atxn1P54254 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms