Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Pdx1P52946 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Pdx1P52946 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pdx1P52946 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdx1P52946 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pdx1P52946 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pdx1P52946 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdx1P52946 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdx1P52946 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pdx1P52946 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pdx1P52946 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pdx1P52946 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.7
Pdx1P52946 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pdx1P52946 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.65□□□□□ -0.7
Pdx1P52946 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pdx1P52946 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.65□□□□□ -0.7
Pdx1P52946 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pdx1P52946 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pdx1P52946 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pdx1P52946 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Pdx1P52946 Gm12337-201ENSMUST00000119634 400 ntBASIC10.65□□□□□ -0.7
Pdx1P52946 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Pdx1P52946 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pdx1P52946 Gm37860-201ENSMUST00000195380 1034 ntBASIC10.65□□□□□ -0.7
Pdx1P52946 Gm31274-201ENSMUST00000197356 229 ntBASIC10.65□□□□□ -0.7
Pdx1P52946 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pdx1P52946 Gm44155-201ENSMUST00000203923 412 ntBASIC10.65□□□□□ -0.7
Pdx1P52946 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC10.65□□□□□ -0.7
Pdx1P52946 Gm45258-201ENSMUST00000210042 853 ntBASIC10.65□□□□□ -0.7
Pdx1P52946 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC10.65□□□□□ -0.7
Pdx1P52946 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pdx1P52946 Gm8170-201ENSMUST00000218581 945 ntBASIC10.65□□□□□ -0.7
Pdx1P52946 Ap3s1-202ENSMUST00000224622 978 ntBASIC10.65□□□□□ -0.7
Pdx1P52946 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pdx1P52946 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Pdx1P52946 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Pdx1P52946 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.65□□□□□ -0.7
Pdx1P52946 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Pdx1P52946 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pdx1P52946 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pdx1P52946 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pdx1P52946 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Pdx1P52946 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.71
Pdx1P52946 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.65□□□□□ -0.71
Pdx1P52946 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Pdx1P52946 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Pdx1P52946 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Pdx1P52946 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Pdx1P52946 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Pdx1P52946 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.65□□□□□ -0.71
Pdx1P52946 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC10.65□□□□□ -0.71
Pdx1P52946 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.64□□□□□ -0.71
Pdx1P52946 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 AC154220.1-201ENSMUST00000225033 1705 ntBASIC10.64□□□□□ -0.71
Pdx1P52946 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Pdx1P52946 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Pdx1P52946 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC10.64□□□□□ -0.71
Pdx1P52946 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Pdx1P52946 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Pdx1P52946 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC10.64□□□□□ -0.71
Pdx1P52946 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC10.64□□□□□ -0.71
Pdx1P52946 Gm24248-201ENSMUST00000157321 322 ntBASIC10.64□□□□□ -0.71
Pdx1P52946 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 Gm7719-201ENSMUST00000182374 975 ntBASIC10.64□□□□□ -0.71
Pdx1P52946 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC10.64□□□□□ -0.71
Pdx1P52946 Gm19587-201ENSMUST00000191395 545 ntBASIC10.64□□□□□ -0.71
Pdx1P52946 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC10.64□□□□□ -0.71
Pdx1P52946 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC10.64□□□□□ -0.71
Pdx1P52946 Gm8181-201ENSMUST00000062242 669 ntBASIC10.64□□□□□ -0.71
Pdx1P52946 Gm9873-201ENSMUST00000063891 1097 ntBASIC10.64□□□□□ -0.71
Pdx1P52946 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Pdx1P52946 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
Pdx1P52946 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdx1P52946 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms