Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-6P43688 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-6P43688 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-6P43688 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-6P43688 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-6P43688 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-6P43688 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-6P43688 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-6P43688 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Nkx2-6P43688 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.25□□□□□ -0.77
Nkx2-6P43688 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-6P43688 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-6P43688 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-6P43688 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Nkx2-6P43688 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-6P43688 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-6P43688 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-6P43688 Gm16459-201ENSMUST00000121443 686 ntBASIC10.25□□□□□ -0.77
Nkx2-6P43688 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC10.25□□□□□ -0.77
Nkx2-6P43688 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-6P43688 Ighv5-8-202ENSMUST00000191967 337 ntBASIC10.25□□□□□ -0.77
Nkx2-6P43688 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-6P43688 Gm37207-201ENSMUST00000194284 296 ntBASIC10.25□□□□□ -0.77
Nkx2-6P43688 Gm37782-201ENSMUST00000194879 678 ntBASIC10.25□□□□□ -0.77
Nkx2-6P43688 Gm43244-201ENSMUST00000196994 1285 ntBASIC10.25□□□□□ -0.77
Nkx2-6P43688 Gm44640-201ENSMUST00000206894 247 ntBASIC10.25□□□□□ -0.77
Nkx2-6P43688 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-6P43688 Gm45258-201ENSMUST00000210042 853 ntBASIC10.25□□□□□ -0.77
Nkx2-6P43688 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Nkx2-6P43688 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Nkx2-6P43688 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-6P43688 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-6P43688 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-6P43688 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-6P43688 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-6P43688 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-6P43688 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-6P43688 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.25□□□□□ -0.77
Nkx2-6P43688 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-6P43688 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-6P43688 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-6P43688 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-6P43688 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-6P43688 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx2-6P43688 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.25□□□□□ -0.77
Nkx2-6P43688 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-6P43688 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
Nkx2-6P43688 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-6P43688 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-6P43688 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-6P43688 AC153524.2-202ENSMUST00000220401 1794 ntBASIC10.24□□□□□ -0.77
Nkx2-6P43688 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-6P43688 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC10.24□□□□□ -0.77
Nkx2-6P43688 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-6P43688 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-6P43688 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC10.24□□□□□ -0.77
Nkx2-6P43688 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC10.24□□□□□ -0.77
Nkx2-6P43688 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-6P43688 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Nkx2-6P43688 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-6P43688 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Nkx2-6P43688 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-6P43688 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-6P43688 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.24□□□□□ -0.77
Nkx2-6P43688 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-6P43688 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-6P43688 Ighv13-1-201ENSMUST00000103480 294 ntBASIC10.24□□□□□ -0.77
Nkx2-6P43688 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-6P43688 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-6P43688 Gm8659-201ENSMUST00000120024 1084 ntBASIC10.24□□□□□ -0.77
Nkx2-6P43688 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC10.24□□□□□ -0.77
Nkx2-6P43688 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Nkx2-6P43688 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.24□□□□□ -0.77
Nkx2-6P43688 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-6P43688 Gm8601-201ENSMUST00000182096 909 ntBASIC10.24□□□□□ -0.77
Nkx2-6P43688 Gm6677-201ENSMUST00000195100 441 ntBASIC10.24□□□□□ -0.77
Nkx2-6P43688 Gm43564-201ENSMUST00000196185 211 ntBASIC10.24□□□□□ -0.77
Nkx2-6P43688 Gm6439-201ENSMUST00000199849 862 ntBASIC10.24□□□□□ -0.77
Nkx2-6P43688 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-6P43688 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC10.24□□□□□ -0.77
Nkx2-6P43688 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-6P43688 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.24□□□□□ -0.77
Nkx2-6P43688 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC10.24□□□□□ -0.77
Nkx2-6P43688 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-6P43688 AC169511.1-201ENSMUST00000227639 995 ntBASIC10.24□□□□□ -0.77
Nkx2-6P43688 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-6P43688 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Nkx2-6P43688 n-R5s71-201ENSMUST00000093668 119 ntBASIC10.24□□□□□ -0.77
Nkx2-6P43688 Gm10580-201ENSMUST00000097985 396 ntBASIC10.24□□□□□ -0.77
Nkx2-6P43688 Gm10582-201ENSMUST00000097987 396 ntBASIC10.24□□□□□ -0.77
Nkx2-6P43688 Gm10583-201ENSMUST00000097988 396 ntBASIC10.24□□□□□ -0.77
Nkx2-6P43688 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.24□□□□□ -0.77
Nkx2-6P43688 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-6P43688 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-6P43688 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Nkx2-6P43688 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-6P43688 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Nkx2-6P43688 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-6P43688 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx2-6P43688 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms