Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Gm8918-201ENSMUST00000190587 1087 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 Gm42710-201ENSMUST00000200608 985 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Pde6aP27664 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC12.5□□□□□ -0.41
Pde6aP27664 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC12.5□□□□□ -0.41
Pde6aP27664 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.5□□□□□ -0.41
Pde6aP27664 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6aP27664 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6aP27664 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Pde6aP27664 Gm24089-201ENSMUST00000093696 109 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6aP27664 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6aP27664 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6aP27664 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6aP27664 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC12.5□□□□□ -0.41
Pde6aP27664 AC207128.2-201ENSMUST00000223708 1924 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pde6aP27664 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6aP27664 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6aP27664 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Pde6aP27664 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Pde6aP27664 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6aP27664 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6aP27664 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6aP27664 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6aP27664 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6aP27664 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6aP27664 Gm37954-201ENSMUST00000195400 2071 ntBASIC12.49□□□□□ -0.41
Pde6aP27664 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6aP27664 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC12.49□□□□□ -0.41
Pde6aP27664 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6aP27664 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.49□□□□□ -0.41
Pde6aP27664 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6aP27664 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6aP27664 Gm11544-201ENSMUST00000120215 382 ntBASIC12.49□□□□□ -0.41
Pde6aP27664 Gm12628-201ENSMUST00000122193 382 ntBASIC12.49□□□□□ -0.41
Pde6aP27664 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC12.49□□□□□ -0.41
Pde6aP27664 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC12.49□□□□□ -0.41
Pde6aP27664 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pde6aP27664 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6aP27664 Gm6771-201ENSMUST00000182716 1001 ntBASIC12.49□□□□□ -0.41
Pde6aP27664 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC12.49□□□□□ -0.41
Pde6aP27664 Gm34379-201ENSMUST00000195036 290 ntBASIC12.49□□□□□ -0.41
Pde6aP27664 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC12.49□□□□□ -0.41
Pde6aP27664 Gm32111-201ENSMUST00000207689 846 ntBASIC12.49□□□□□ -0.41
Pde6aP27664 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Pde6aP27664 Gm7319-201ENSMUST00000210047 778 ntBASIC12.49□□□□□ -0.41
Pde6aP27664 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Pde6aP27664 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pde6aP27664 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pde6aP27664 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6aP27664 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6aP27664 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.49□□□□□ -0.41
Pde6aP27664 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.49□□□□□ -0.41
Pde6aP27664 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.49□□□□□ -0.41
Pde6aP27664 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pde6aP27664 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6aP27664 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6aP27664 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6aP27664 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6aP27664 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6aP27664 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6aP27664 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC12.48□□□□□ -0.41
Pde6aP27664 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6aP27664 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pde6aP27664 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6aP27664 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6aP27664 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6aP27664 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6aP27664 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6aP27664 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6aP27664 Gm38344-201ENSMUST00000195306 1353 ntBASIC12.48□□□□□ -0.41
Pde6aP27664 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6aP27664 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6aP27664 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC12.48□□□□□ -0.41
Pde6aP27664 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6aP27664 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC12.48□□□□□ -0.41
Pde6aP27664 Gm6758-201ENSMUST00000119643 1055 ntBASIC12.48□□□□□ -0.41
Pde6aP27664 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6aP27664 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6aP27664 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.48□□□□□ -0.41
Pde6aP27664 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Pde6aP27664 Gm6352-201ENSMUST00000203583 1134 ntBASIC12.48□□□□□ -0.41
Pde6aP27664 AC154431.1-201ENSMUST00000224910 880 ntBASIC12.48□□□□□ -0.41
Pde6aP27664 CT010480.2-201ENSMUST00000225424 737 ntBASIC12.48□□□□□ -0.41
Pde6aP27664 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6aP27664 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Pde6aP27664 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6aP27664 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6aP27664 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6aP27664 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC12.48□□□□□ -0.41
Pde6aP27664 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6aP27664 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6aP27664 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC12.48□□□□□ -0.41
Pde6aP27664 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6aP27664 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6aP27664 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Pde6aP27664 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6aP27664 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6aP27664 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms