Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col8a2P25318 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC8.99□□□□□ -0.97
Col8a2P25318 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC8.99□□□□□ -0.97
Col8a2P25318 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col8a2P25318 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC8.99□□□□□ -0.97
Col8a2P25318 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC8.99□□□□□ -0.97
Col8a2P25318 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col8a2P25318 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col8a2P25318 Gm13039-201ENSMUST00000118638 794 ntBASIC8.99□□□□□ -0.97
Col8a2P25318 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC8.99□□□□□ -0.97
Col8a2P25318 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col8a2P25318 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC8.99□□□□□ -0.97
Col8a2P25318 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC8.99□□□□□ -0.97
Col8a2P25318 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Col8a2P25318 Gm26272-201ENSMUST00000179241 132 ntBASIC8.99□□□□□ -0.97
Col8a2P25318 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC8.99□□□□□ -0.97
Col8a2P25318 Gm43564-201ENSMUST00000196185 211 ntBASIC8.99□□□□□ -0.97
Col8a2P25318 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC8.99□□□□□ -0.97
Col8a2P25318 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC8.99□□□□□ -0.97
Col8a2P25318 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC8.99□□□□□ -0.97
Col8a2P25318 AC159376.1-201ENSMUST00000218504 630 ntBASIC8.99□□□□□ -0.97
Col8a2P25318 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC8.99□□□□□ -0.97
Col8a2P25318 AC102847.1-202ENSMUST00000226313 1245 ntBASIC8.99□□□□□ -0.97
Col8a2P25318 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Col8a2P25318 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Col8a2P25318 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Col8a2P25318 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col8a2P25318 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col8a2P25318 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col8a2P25318 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col8a2P25318 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col8a2P25318 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Col8a2P25318 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Col8a2P25318 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col8a2P25318 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col8a2P25318 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC8.99□□□□□ -0.97
Col8a2P25318 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col8a2P25318 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Col8a2P25318 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Col8a2P25318 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col8a2P25318 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col8a2P25318 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Col8a2P25318 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Col8a2P25318 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col8a2P25318 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Col8a2P25318 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col8a2P25318 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col8a2P25318 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col8a2P25318 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col8a2P25318 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col8a2P25318 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC8.98□□□□□ -0.97
Col8a2P25318 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col8a2P25318 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Col8a2P25318 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col8a2P25318 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col8a2P25318 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC8.98□□□□□ -0.97
Col8a2P25318 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Col8a2P25318 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col8a2P25318 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Col8a2P25318 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Col8a2P25318 Gm23612-201ENSMUST00000103823 110 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col8a2P25318 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Col8a2P25318 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
Col8a2P25318 Gm12947-201ENSMUST00000116114 420 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Gm11544-201ENSMUST00000120215 382 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Gm16167-201ENSMUST00000160428 1065 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC8.98□□□□□ -0.97
Col8a2P25318 Gm23400-201ENSMUST00000174994 102 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Gm26463-201ENSMUST00000175065 101 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Gm24332-201ENSMUST00000175102 102 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Gm25959-201ENSMUST00000175112 102 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Gm22475-201ENSMUST00000175169 102 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Gm22903-201ENSMUST00000175193 102 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Gm25070-201ENSMUST00000175237 102 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Gm24159-201ENSMUST00000175264 102 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Gm25299-201ENSMUST00000175283 102 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Gm23798-201ENSMUST00000175560 102 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Gm23802-201ENSMUST00000175565 102 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Gm25708-201ENSMUST00000177687 102 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Gm24370-201ENSMUST00000178007 102 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Gm23049-201ENSMUST00000178068 102 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Gm28019-201ENSMUST00000178138 101 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Gm25571-201ENSMUST00000178322 102 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Gm25355-201ENSMUST00000178456 101 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Gm24975-201ENSMUST00000178492 101 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Gm23189-201ENSMUST00000178954 102 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Gm25100-201ENSMUST00000179750 101 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Gm23064-201ENSMUST00000179866 101 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Gm23576-201ENSMUST00000179918 110 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Gm7928-201ENSMUST00000181249 701 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Uba52-ps-201ENSMUST00000183770 379 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Gm18801-201ENSMUST00000186616 536 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col8a2P25318 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Col8a2P25318 Gm7047-201ENSMUST00000196224 1063 ntBASIC8.98□□□□□ -0.97
Col8a2P25318 Gm45745-201ENSMUST00000211447 1180 ntBASIC8.98□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms