Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc9P09633 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc9P09633 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc9P09633 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC13.92□□□□□ -0.18
Hoxc9P09633 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Hoxc9P09633 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Hoxc9P09633 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC13.91□□□□□ -0.18
Hoxc9P09633 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc9P09633 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Hoxc9P09633 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC13.91□□□□□ -0.18
Hoxc9P09633 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc9P09633 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc9P09633 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc9P09633 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
Hoxc9P09633 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc9P09633 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Hoxc9P09633 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc9P09633 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc9P09633 Gm38048-201ENSMUST00000193778 2174 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc9P09633 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc9P09633 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc9P09633 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Hoxc9P09633 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc9P09633 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc9P09633 Gstm6-204ENSMUST00000106684 1179 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc9P09633 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC13.91□□□□□ -0.18
Hoxc9P09633 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC13.91□□□□□ -0.18
Hoxc9P09633 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC13.91□□□□□ -0.18
Hoxc9P09633 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Hoxc9P09633 Gm5501-201ENSMUST00000165917 832 ntBASIC13.91□□□□□ -0.18
Hoxc9P09633 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc9P09633 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC13.91□□□□□ -0.18
Hoxc9P09633 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC13.91□□□□□ -0.18
Hoxc9P09633 CU025215.1-201ENSMUST00000222986 603 ntBASIC13.91□□□□□ -0.18
Hoxc9P09633 AC163646.3-202ENSMUST00000228685 691 ntBASIC13.91□□□□□ -0.18
Hoxc9P09633 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc9P09633 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Hoxc9P09633 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc9P09633 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC13.91□□□□□ -0.18
Hoxc9P09633 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Hoxc9P09633 Gm42849-201ENSMUST00000202834 1584 ntTSL 5 BASIC13.91□□□□□ -0.18
Hoxc9P09633 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc9P09633 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc9P09633 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc9P09633 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Hoxc9P09633 Gm45170-201ENSMUST00000206746 1671 ntBASIC13.91□□□□□ -0.18
Hoxc9P09633 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc9P09633 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc9P09633 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Hoxc9P09633 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc9P09633 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc9P09633 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Hoxc9P09633 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc9P09633 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc9P09633 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc9P09633 Gm6727-201ENSMUST00000204102 1518 ntBASIC13.9□□□□□ -0.18
Hoxc9P09633 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc9P09633 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Hoxc9P09633 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc9P09633 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Hoxc9P09633 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc9P09633 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Hoxc9P09633 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc9P09633 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Hoxc9P09633 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Hoxc9P09633 Gm14341-201ENSMUST00000154616 667 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc9P09633 Gm4775-201ENSMUST00000169588 402 ntBASIC13.9□□□□□ -0.18
Hoxc9P09633 Gm8707-201ENSMUST00000183325 980 ntBASIC13.9□□□□□ -0.18
Hoxc9P09633 Uba52-ps-201ENSMUST00000183770 379 ntBASIC13.9□□□□□ -0.18
Hoxc9P09633 Gm29304-201ENSMUST00000186555 695 ntBASIC13.9□□□□□ -0.18
Hoxc9P09633 Gm29223-201ENSMUST00000188867 695 ntBASIC13.9□□□□□ -0.18
Hoxc9P09633 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC13.9□□□□□ -0.18
Hoxc9P09633 Gm37921-201ENSMUST00000194333 695 ntBASIC13.9□□□□□ -0.18
Hoxc9P09633 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC13.9□□□□□ -0.18
Hoxc9P09633 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc9P09633 Gm5881-201ENSMUST00000204737 367 ntBASIC13.9□□□□□ -0.18
Hoxc9P09633 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC13.9□□□□□ -0.18
Hoxc9P09633 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc9P09633 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc9P09633 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc9P09633 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Hoxc9P09633 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Hoxc9P09633 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc9P09633 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc9P09633 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc9P09633 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Hoxc9P09633 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Hoxc9P09633 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc9P09633 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc9P09633 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc9P09633 Gm43375-201ENSMUST00000196705 2480 ntBASIC13.89□□□□□ -0.19
Hoxc9P09633 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc9P09633 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.89□□□□□ -0.19
Hoxc9P09633 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc9P09633 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc9P09633 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Hoxc9P09633 Dcstamp-201ENSMUST00000022913 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc9P09633 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC13.89□□□□□ -0.19
Hoxc9P09633 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc9P09633 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms