Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Gm12516-201ENSMUST00000120819 385 ntBASIC11.03□□□□□ -0.64
PdgfrbP05622 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdgfrbP05622 Gm16165-201ENSMUST00000160140 795 ntBASIC11.03□□□□□ -0.64
PdgfrbP05622 Mipep-ps-201ENSMUST00000177439 291 ntBASIC11.03□□□□□ -0.64
PdgfrbP05622 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdgfrbP05622 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
PdgfrbP05622 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC11.03□□□□□ -0.64
PdgfrbP05622 Gm17983-201ENSMUST00000190766 594 ntBASIC11.03□□□□□ -0.64
PdgfrbP05622 Gm44158-201ENSMUST00000203881 505 ntBASIC11.03□□□□□ -0.64
PdgfrbP05622 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.03□□□□□ -0.64
PdgfrbP05622 Gm18042-201ENSMUST00000219887 790 ntBASIC11.03□□□□□ -0.64
PdgfrbP05622 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
PdgfrbP05622 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdgfrbP05622 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdgfrbP05622 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdgfrbP05622 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdgfrbP05622 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdgfrbP05622 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.03□□□□□ -0.64
PdgfrbP05622 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdgfrbP05622 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.03□□□□□ -0.64
PdgfrbP05622 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.03□□□□□ -0.64
PdgfrbP05622 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC11.03□□□□□ -0.64
PdgfrbP05622 Gm6641-201ENSMUST00000196100 1315 ntBASIC11.03□□□□□ -0.64
PdgfrbP05622 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdgfrbP05622 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
PdgfrbP05622 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
PdgfrbP05622 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
PdgfrbP05622 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdgfrbP05622 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdgfrbP05622 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdgfrbP05622 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdgfrbP05622 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
PdgfrbP05622 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdgfrbP05622 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.02□□□□□ -0.64
PdgfrbP05622 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
PdgfrbP05622 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
PdgfrbP05622 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.02□□□□□ -0.64
PdgfrbP05622 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
PdgfrbP05622 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
PdgfrbP05622 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.02□□□□□ -0.64
PdgfrbP05622 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
PdgfrbP05622 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
PdgfrbP05622 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
PdgfrbP05622 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
PdgfrbP05622 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
PdgfrbP05622 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdgfrbP05622 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdgfrbP05622 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdgfrbP05622 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC11.02□□□□□ -0.65
PdgfrbP05622 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdgfrbP05622 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdgfrbP05622 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
PdgfrbP05622 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
PdgfrbP05622 Gm18294-201ENSMUST00000176980 1748 ntBASIC11.02□□□□□ -0.65
PdgfrbP05622 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdgfrbP05622 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdgfrbP05622 Snord23-201ENSMUST00000116828 109 ntBASIC11.02□□□□□ -0.65
PdgfrbP05622 Gm5909-201ENSMUST00000119768 1281 ntBASIC11.02□□□□□ -0.65
PdgfrbP05622 Gm13117-201ENSMUST00000120894 691 ntBASIC11.02□□□□□ -0.65
PdgfrbP05622 Gm11952-201ENSMUST00000121172 821 ntBASIC11.02□□□□□ -0.65
PdgfrbP05622 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdgfrbP05622 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.02□□□□□ -0.65
PdgfrbP05622 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
PdgfrbP05622 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
PdgfrbP05622 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
PdgfrbP05622 Gm27441-201ENSMUST00000185000 105 ntBASIC11.02□□□□□ -0.65
PdgfrbP05622 Gm3508-201ENSMUST00000186012 792 ntBASIC11.02□□□□□ -0.65
PdgfrbP05622 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
PdgfrbP05622 Gm8480-201ENSMUST00000190350 698 ntBASIC11.02□□□□□ -0.65
PdgfrbP05622 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC11.02□□□□□ -0.65
PdgfrbP05622 Ermard-209ENSMUST00000226561 1019 ntBASIC11.02□□□□□ -0.65
PdgfrbP05622 AC136376.2-201ENSMUST00000228819 490 ntBASIC11.02□□□□□ -0.65
PdgfrbP05622 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdgfrbP05622 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
PdgfrbP05622 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdgfrbP05622 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdgfrbP05622 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdgfrbP05622 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdgfrbP05622 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdgfrbP05622 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
PdgfrbP05622 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdgfrbP05622 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdgfrbP05622 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.02□□□□□ -0.65
PdgfrbP05622 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdgfrbP05622 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdgfrbP05622 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
PdgfrbP05622 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
PdgfrbP05622 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdgfrbP05622 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
PdgfrbP05622 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
PdgfrbP05622 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.02□□□□□ -0.65
PdgfrbP05622 Gm19027-201ENSMUST00000187291 1355 ntBASIC11.02□□□□□ -0.65
PdgfrbP05622 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
PdgfrbP05622 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdgfrbP05622 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdgfrbP05622 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PdgfrbP05622 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PdgfrbP05622 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
PdgfrbP05622 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PdgfrbP05622 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms