Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 AC117648.1-201ENSMUST00000219777 2510 ntBASIC11.06□□□□□ -0.64
CopeO89079 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC11.06□□□□□ -0.64
CopeO89079 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CopeO89079 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CopeO89079 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CopeO89079 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CopeO89079 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC11.06□□□□□ -0.64
CopeO89079 Fubp1-201ENSMUST00000106121 4525 ntAPPRIS P2 TSL 2 BASIC11.06□□□□□ -0.64
CopeO89079 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CopeO89079 Cdh18-207ENSMUST00000226693 2165 ntBASIC11.06□□□□□ -0.64
CopeO89079 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CopeO89079 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC11.06□□□□□ -0.64
CopeO89079 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CopeO89079 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CopeO89079 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
CopeO89079 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
CopeO89079 Gm16518-201ENSMUST00000117960 508 ntBASIC11.06□□□□□ -0.64
CopeO89079 Gm11956-201ENSMUST00000119525 512 ntBASIC11.06□□□□□ -0.64
CopeO89079 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
CopeO89079 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CopeO89079 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.06□□□□□ -0.64
CopeO89079 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CopeO89079 Gm25661-201ENSMUST00000157704 296 ntBASIC11.06□□□□□ -0.64
CopeO89079 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CopeO89079 Gm27341-201ENSMUST00000183570 106 ntBASIC11.06□□□□□ -0.64
CopeO89079 Gm27953-201ENSMUST00000185171 143 ntBASIC11.06□□□□□ -0.64
CopeO89079 Gm37905-201ENSMUST00000195310 341 ntBASIC11.06□□□□□ -0.64
CopeO89079 Gm37826-201ENSMUST00000195329 322 ntBASIC11.06□□□□□ -0.64
CopeO89079 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.06□□□□□ -0.64
CopeO89079 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
CopeO89079 Gm5599-201ENSMUST00000209602 788 ntBASIC11.06□□□□□ -0.64
CopeO89079 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
CopeO89079 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.06□□□□□ -0.64
CopeO89079 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.06□□□□□ -0.64
CopeO89079 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CopeO89079 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
CopeO89079 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CopeO89079 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CopeO89079 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CopeO89079 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC11.06□□□□□ -0.64
CopeO89079 Gm37516-201ENSMUST00000192593 1954 ntBASIC11.06□□□□□ -0.64
CopeO89079 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CopeO89079 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
CopeO89079 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CopeO89079 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CopeO89079 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CopeO89079 Gm7405-201ENSMUST00000121476 1337 ntBASIC11.06□□□□□ -0.64
CopeO89079 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
CopeO89079 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CopeO89079 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
CopeO89079 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
CopeO89079 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CopeO89079 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC11.06□□□□□ -0.64
CopeO89079 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC11.06□□□□□ -0.64
CopeO89079 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CopeO89079 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CopeO89079 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CopeO89079 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CopeO89079 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CopeO89079 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CopeO89079 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CopeO89079 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CopeO89079 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CopeO89079 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CopeO89079 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CopeO89079 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CopeO89079 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CopeO89079 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CopeO89079 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
CopeO89079 Zfat-204ENSMUST00000162054 4386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CopeO89079 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
CopeO89079 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.05□□□□□ -0.64
CopeO89079 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC11.05□□□□□ -0.64
CopeO89079 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CopeO89079 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.05□□□□□ -0.64
CopeO89079 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CopeO89079 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CopeO89079 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC11.05□□□□□ -0.64
CopeO89079 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.05□□□□□ -0.64
CopeO89079 Gm23045-201ENSMUST00000175041 96 ntBASIC11.05□□□□□ -0.64
CopeO89079 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CopeO89079 Gm38312-201ENSMUST00000195426 1746 ntBASIC11.05□□□□□ -0.64
CopeO89079 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.05□□□□□ -0.64
CopeO89079 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC11.05□□□□□ -0.64
CopeO89079 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.05□□□□□ -0.64
CopeO89079 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.05□□□□□ -0.64
CopeO89079 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CopeO89079 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CopeO89079 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CopeO89079 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
CopeO89079 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
CopeO89079 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
CopeO89079 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
CopeO89079 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CopeO89079 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CopeO89079 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CopeO89079 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
CopeO89079 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CopeO89079 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CopeO89079 Gm6641-201ENSMUST00000196100 1315 ntBASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms