Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NpcdF8VQB8 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NpcdF8VQB8 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NpcdF8VQB8 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
NpcdF8VQB8 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
NpcdF8VQB8 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NpcdF8VQB8 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NpcdF8VQB8 Gm15599-201ENSMUST00000122283 1345 ntBASIC13.07□□□□□ -0.32
NpcdF8VQB8 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NpcdF8VQB8 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NpcdF8VQB8 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NpcdF8VQB8 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC13.07□□□□□ -0.32
NpcdF8VQB8 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NpcdF8VQB8 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC13.07□□□□□ -0.32
NpcdF8VQB8 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC13.07□□□□□ -0.32
NpcdF8VQB8 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NpcdF8VQB8 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.07□□□□□ -0.32
NpcdF8VQB8 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NpcdF8VQB8 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
NpcdF8VQB8 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NpcdF8VQB8 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NpcdF8VQB8 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NpcdF8VQB8 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NpcdF8VQB8 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NpcdF8VQB8 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NpcdF8VQB8 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NpcdF8VQB8 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NpcdF8VQB8 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
NpcdF8VQB8 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NpcdF8VQB8 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NpcdF8VQB8 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NpcdF8VQB8 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
NpcdF8VQB8 Gm5071-201ENSMUST00000104922 1035 ntBASIC13.06□□□□□ -0.32
NpcdF8VQB8 Gm15476-201ENSMUST00000118247 1191 ntBASIC13.06□□□□□ -0.32
NpcdF8VQB8 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC13.06□□□□□ -0.32
NpcdF8VQB8 Mir1893-201ENSMUST00000122565 83 ntBASIC13.06□□□□□ -0.32
NpcdF8VQB8 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC13.06□□□□□ -0.32
NpcdF8VQB8 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC13.06□□□□□ -0.32
NpcdF8VQB8 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NpcdF8VQB8 Gm13857-201ENSMUST00000139645 173 ntBASIC13.06□□□□□ -0.32
NpcdF8VQB8 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC13.06□□□□□ -0.32
NpcdF8VQB8 Gm23479-201ENSMUST00000158876 122 ntBASIC13.06□□□□□ -0.32
NpcdF8VQB8 Gm36172-201ENSMUST00000219852 723 ntTSL 3 BASIC13.06□□□□□ -0.32
NpcdF8VQB8 CT571271.1-201ENSMUST00000227071 670 ntBASIC13.06□□□□□ -0.32
NpcdF8VQB8 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NpcdF8VQB8 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
NpcdF8VQB8 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NpcdF8VQB8 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NpcdF8VQB8 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC13.06□□□□□ -0.32
NpcdF8VQB8 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NpcdF8VQB8 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NpcdF8VQB8 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NpcdF8VQB8 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NpcdF8VQB8 Gm5822-201ENSMUST00000161562 1378 ntBASIC13.06□□□□□ -0.32
NpcdF8VQB8 Gm19027-201ENSMUST00000187291 1355 ntBASIC13.06□□□□□ -0.32
NpcdF8VQB8 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC13.06□□□□□ -0.32
NpcdF8VQB8 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NpcdF8VQB8 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
NpcdF8VQB8 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NpcdF8VQB8 Gm5739-201ENSMUST00000208601 1703 ntBASIC13.05□□□□□ -0.32
NpcdF8VQB8 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NpcdF8VQB8 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
NpcdF8VQB8 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC13.05□□□□□ -0.32
NpcdF8VQB8 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NpcdF8VQB8 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NpcdF8VQB8 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NpcdF8VQB8 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC13.05□□□□□ -0.32
NpcdF8VQB8 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NpcdF8VQB8 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NpcdF8VQB8 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC13.05□□□□□ -0.32
NpcdF8VQB8 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NpcdF8VQB8 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC13.05□□□□□ -0.32
NpcdF8VQB8 Gm9619-201ENSMUST00000211587 762 ntBASIC13.05□□□□□ -0.32
NpcdF8VQB8 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
NpcdF8VQB8 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NpcdF8VQB8 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC13.05□□□□□ -0.32
NpcdF8VQB8 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC13.05□□□□□ -0.32
NpcdF8VQB8 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NpcdF8VQB8 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NpcdF8VQB8 Gm44153-201ENSMUST00000204162 1580 ntBASIC13.05□□□□□ -0.32
NpcdF8VQB8 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
NpcdF8VQB8 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
NpcdF8VQB8 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NpcdF8VQB8 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NpcdF8VQB8 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NpcdF8VQB8 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NpcdF8VQB8 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NpcdF8VQB8 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
NpcdF8VQB8 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
NpcdF8VQB8 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NpcdF8VQB8 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
NpcdF8VQB8 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NpcdF8VQB8 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NpcdF8VQB8 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC13.04□□□□□ -0.32
NpcdF8VQB8 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NpcdF8VQB8 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
NpcdF8VQB8 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC13.04□□□□□ -0.32
NpcdF8VQB8 Gm7781-201ENSMUST00000117258 788 ntBASIC13.04□□□□□ -0.32
NpcdF8VQB8 Mup-ps29-201ENSMUST00000122281 202 ntBASIC13.04□□□□□ -0.32
NpcdF8VQB8 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 135.3 ms