Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm8320-201ENSMUST00000177584 1762 ntBASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Gm8303-201ENSMUST00000178371 1762 ntBASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Gm8331-201ENSMUST00000178433 1762 ntBASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Gm3372-201ENSMUST00000198806 1792 ntBASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Gm3765-201ENSMUST00000130985 1447 ntBASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Gm9133-201ENSMUST00000118289 540 ntBASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Gm11451-201ENSMUST00000118946 630 ntBASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Gm13937-201ENSMUST00000121000 988 ntBASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Gm4917-201ENSMUST00000121452 650 ntBASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Mir1956-201ENSMUST00000157748 65 ntBASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Gm42588-201ENSMUST00000200538 1297 ntBASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 AC102368.1-201ENSMUST00000227161 892 ntBASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Mirlet7i-201ENSMUST00000083472 85 ntBASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 AC154528.2-201ENSMUST00000228432 3023 ntBASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Gm37031-201ENSMUST00000195487 2530 ntBASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sec61a2Q9JLR1 Gm19040-201ENSMUST00000203280 4726 ntBASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Tti2-201ENSMUST00000098842 5039 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Gm12986-201ENSMUST00000119037 967 ntBASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Gm18159-201ENSMUST00000174516 1070 ntBASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Mir7032-201ENSMUST00000185154 79 ntBASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Gm17877-201ENSMUST00000192578 814 ntBASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Gm18561-201ENSMUST00000206027 804 ntBASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Gm18798-201ENSMUST00000187264 1700 ntBASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Gm19165-201ENSMUST00000204453 1982 ntBASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Sec61a2Q9JLR1 Gm38271-201ENSMUST00000192296 1603 ntBASIC9.74□□□□□ -0.85
Sec61a2Q9JLR1 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Sec61a2Q9JLR1 Fermt1-201ENSMUST00000038280 4915 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Sec61a2Q9JLR1 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sec61a2Q9JLR1 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms