Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC12.89□□□□□ -0.35
Chmp4cQ9D7F7 Gm43163-201ENSMUST00000196571 442 ntBASIC12.89□□□□□ -0.35
Chmp4cQ9D7F7 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.89□□□□□ -0.35
Chmp4cQ9D7F7 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.89□□□□□ -0.35
Chmp4cQ9D7F7 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.89□□□□□ -0.35
Chmp4cQ9D7F7 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.89□□□□□ -0.35
Chmp4cQ9D7F7 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp4cQ9D7F7 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp4cQ9D7F7 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Chmp4cQ9D7F7 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp4cQ9D7F7 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.89□□□□□ -0.35
Chmp4cQ9D7F7 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp4cQ9D7F7 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp4cQ9D7F7 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
Chmp4cQ9D7F7 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp4cQ9D7F7 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp4cQ9D7F7 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC12.89□□□□□ -0.35
Chmp4cQ9D7F7 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp4cQ9D7F7 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp4cQ9D7F7 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp4cQ9D7F7 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp4cQ9D7F7 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp4cQ9D7F7 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp4cQ9D7F7 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp4cQ9D7F7 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Mgme1-201ENSMUST00000028910 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Gm3551-201ENSMUST00000190750 664 ntBASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Gm44980-201ENSMUST00000205826 314 ntBASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Gm25580-201ENSMUST00000083409 327 ntBASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Clgn-201ENSMUST00000002259 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Gm45089-201ENSMUST00000208082 2040 ntBASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp4cQ9D7F7 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Gm8320-201ENSMUST00000177584 1762 ntBASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Gm8303-201ENSMUST00000178371 1762 ntBASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Gm8331-201ENSMUST00000178433 1762 ntBASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 AC108416.1-201ENSMUST00000228755 1558 ntBASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Gm5308-201ENSMUST00000196752 1354 ntBASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Fgf14-201ENSMUST00000026631 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Gm15197-201ENSMUST00000120526 478 ntBASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Gm24074-201ENSMUST00000158178 260 ntBASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Gm43520-201ENSMUST00000197996 164 ntBASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 AC122035.1-201ENSMUST00000227576 1016 ntBASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Gm10263-201ENSMUST00000085163 300 ntBASIC12.87□□□□□ -0.35
Chmp4cQ9D7F7 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms