Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Gm38192-201ENSMUST00000194364 1847 ntBASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Gm13192-201ENSMUST00000101199 208 ntBASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Gm23132-201ENSMUST00000104254 132 ntBASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Gm10443-201ENSMUST00000119024 210 ntBASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Gm15746-201ENSMUST00000120684 1027 ntBASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Gm14113-201ENSMUST00000121399 976 ntBASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Gm26313-201ENSMUST00000157770 308 ntBASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Gm25872-201ENSMUST00000177784 100 ntBASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Gm38007-201ENSMUST00000192187 313 ntBASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Gm20568-201ENSMUST00000197129 208 ntBASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Gm18010-201ENSMUST00000203553 202 ntBASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdhga6Q91XY2 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 Gm43167-201ENSMUST00000202001 1606 ntBASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 Gm24933-201ENSMUST00000103762 110 ntBASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 Gm23252-201ENSMUST00000103776 110 ntBASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 Gm8659-201ENSMUST00000120024 1084 ntBASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 Gm25394-201ENSMUST00000157338 133 ntBASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 Gm26443-201ENSMUST00000179610 110 ntBASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 Gm7572-201ENSMUST00000182616 766 ntBASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 Gm8226-201ENSMUST00000190511 798 ntBASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 Gm17936-201ENSMUST00000199413 988 ntBASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 AC154477.1-201ENSMUST00000226515 773 ntBASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 AC121567.1-201ENSMUST00000227213 842 ntBASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 AC137842.2-201ENSMUST00000227734 797 ntBASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Pcdhga6Q91XY2 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms