Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 AC154528.2-201ENSMUST00000228432 3023 ntBASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trim29Q8R2Q0 Gm37954-201ENSMUST00000195400 2071 ntBASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Gm15782-201ENSMUST00000121073 445 ntBASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Gm44814-201ENSMUST00000207018 434 ntBASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 CT025679.1-201ENSMUST00000227106 449 ntBASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim29Q8R2Q0 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trim29Q8R2Q0 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trim29Q8R2Q0 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 Gm23061-201ENSMUST00000102348 116 ntBASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 Snord23-201ENSMUST00000116828 109 ntBASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 Gm8531-201ENSMUST00000188319 893 ntBASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 Gm7047-201ENSMUST00000196224 1063 ntBASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 Gm5865-201ENSMUST00000198713 637 ntBASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 Gm19091-201ENSMUST00000208120 978 ntBASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 CT025553.1-201ENSMUST00000226292 299 ntBASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 Gm26660-202ENSMUST00000223620 4112 ntBASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 AC108416.1-201ENSMUST00000228755 1558 ntBASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 Gm45041-201ENSMUST00000207366 3108 ntBASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim29Q8R2Q0 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms