Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm28624-201ENSMUST00000186430 2131 ntBASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Gm12830-201ENSMUST00000137570 2306 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Gm24891-201ENSMUST00000104391 136 ntBASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Gm15528-201ENSMUST00000117821 864 ntBASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Gm8302-201ENSMUST00000119217 852 ntBASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Gm11244-201ENSMUST00000121243 237 ntBASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Recql5os1-201ENSMUST00000134391 396 ntTSL 5 BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Gm23694-201ENSMUST00000179335 110 ntBASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Gm37259-201ENSMUST00000193903 849 ntBASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Gm44506-201ENSMUST00000206278 965 ntBASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Gm21811-201ENSMUST00000096485 930 ntBASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Cacna1d-207ENSMUST00000224198 6564 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Gm36638-202ENSMUST00000192073 2169 ntBASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 5830462I19Rik-201ENSMUST00000168137 3383 ntBASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Dlgap2-208ENSMUST00000150247 3138 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Gphn-201ENSMUST00000052472 3570 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Tmem184b-205ENSMUST00000228002 3315 ntBASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Prdx6-202ENSMUST00000071718 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 1700010I14Rik-203ENSMUST00000151609 1853 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc28bQ8CEG5 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Gm37032-201ENSMUST00000194882 2975 ntBASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Dis3l2-202ENSMUST00000168237 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Tmco4-201ENSMUST00000043042 2922 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Prkcd-208ENSMUST00000112211 2851 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Gcom1-204ENSMUST00000166843 1521 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Gm37759-201ENSMUST00000194155 3246 ntBASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Npy1r-202ENSMUST00000212588 2770 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Adamtsl2-201ENSMUST00000091233 3612 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Gm14130-201ENSMUST00000118417 987 ntBASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Gm12501-201ENSMUST00000119163 529 ntBASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Gm27953-201ENSMUST00000185171 143 ntBASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Gm5865-201ENSMUST00000198713 637 ntBASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Gm5869-201ENSMUST00000200248 1257 ntBASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Gm3961-201ENSMUST00000204425 994 ntBASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Gm44974-201ENSMUST00000206387 1279 ntBASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Gm9826-201ENSMUST00000029124 1299 ntBASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Ilf3-203ENSMUST00000213518 3513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Colq-205ENSMUST00000150054 2867 ntTSL 5 BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc28bQ8CEG5 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Ccdc28bQ8CEG5 Zbtb3-201ENSMUST00000172175 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 248.3 ms