Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Gm23769-201ENSMUST00000104441 121 ntBASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Gm12986-201ENSMUST00000119037 967 ntBASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Gm19246-201ENSMUST00000173599 255 ntBASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Gm45481-201ENSMUST00000209717 877 ntBASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 AC154407.1-201ENSMUST00000226777 526 ntBASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Gm11298-201ENSMUST00000120503 1799 ntBASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 AC022682.1-201ENSMUST00000224624 2023 ntBASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Gm42432-201ENSMUST00000197902 1617 ntBASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Gm43143-201ENSMUST00000196083 2023 ntBASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Gm23255-201ENSMUST00000102244 110 ntBASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Gm11380-201ENSMUST00000118067 560 ntBASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Gm9166-201ENSMUST00000120293 561 ntBASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Gm11952-201ENSMUST00000121172 821 ntBASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Gm6612-201ENSMUST00000170777 395 ntBASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 n-R5s130-201ENSMUST00000178128 119 ntBASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Gm24312-201ENSMUST00000178677 119 ntBASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 n-R5s106-201ENSMUST00000179060 119 ntBASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 n-R5s118-201ENSMUST00000179887 119 ntBASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Gm17796-201ENSMUST00000189015 1213 ntBASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 AC158986.2-201ENSMUST00000227487 618 ntBASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.32□□□□□ -0.6
Ccdc17Q8CE13 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms