Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Gabra5-203ENSMUST00000206734 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Gm7742-201ENSMUST00000167648 1527 ntBASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Gm7732-201ENSMUST00000170486 1527 ntBASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Gm7740-201ENSMUST00000186171 1527 ntBASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Gm7736-201ENSMUST00000096981 1527 ntBASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Mapkap1-203ENSMUST00000113126 3018 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Gm44914-201ENSMUST00000207191 2720 ntBASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Tm4sf1-201ENSMUST00000029376 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Gm12799-201ENSMUST00000118151 2560 ntBASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Gm37697-201ENSMUST00000195680 1844 ntBASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Gm25554-201ENSMUST00000158075 113 ntBASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Gm23771-201ENSMUST00000178702 110 ntBASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Gm44100-201ENSMUST00000204329 436 ntBASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Gm19091-201ENSMUST00000208120 978 ntBASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Gm31941-201ENSMUST00000209689 350 ntBASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Gm7405-201ENSMUST00000121476 1337 ntBASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Gm16387-201ENSMUST00000180990 2632 ntBASIC12.05□□□□□ -0.48
Ccdc38Q8CDN8 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 Gm43086-201ENSMUST00000202536 2657 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 Sh2d7-201ENSMUST00000060242 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 Gm15264-201ENSMUST00000118050 502 ntBASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 Gm11952-201ENSMUST00000121172 821 ntBASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 Gm27910-201ENSMUST00000185004 107 ntBASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 Gm9369-201ENSMUST00000196009 733 ntBASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ccdc38Q8CDN8 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms