Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Gm16518-201ENSMUST00000117960 508 ntBASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Gm12030-201ENSMUST00000121917 223 ntBASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Gm22379-201ENSMUST00000157480 131 ntBASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Gm29410-201ENSMUST00000188383 694 ntBASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Gm3726-201ENSMUST00000203110 785 ntBASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Gm45124-201ENSMUST00000206723 2755 ntBASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Gm8255-201ENSMUST00000218693 305 ntBASIC11.56□□□□□ -0.56
Trim65Q8BFW4 AC164429.1-201ENSMUST00000224210 518 ntBASIC11.56□□□□□ -0.56
Trim65Q8BFW4 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.56□□□□□ -0.56
Trim65Q8BFW4 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim65Q8BFW4 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.55□□□□□ -0.56
Trim65Q8BFW4 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Gm5529-201ENSMUST00000165691 891 ntBASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Gm34023-201ENSMUST00000195539 217 ntBASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Gm43097-201ENSMUST00000196867 151 ntBASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Gm42660-201ENSMUST00000197733 947 ntBASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Gm44155-201ENSMUST00000203923 412 ntBASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Gm9139-201ENSMUST00000218817 700 ntBASIC11.55□□□□□ -0.56
Trim65Q8BFW4 CT030166.5-201ENSMUST00000222249 420 ntBASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Prrxl1-205ENSMUST00000228878 723 ntBASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim65Q8BFW4 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim65Q8BFW4 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim65Q8BFW4 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trim65Q8BFW4 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim65Q8BFW4 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim65Q8BFW4 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trim65Q8BFW4 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim65Q8BFW4 Gm43052-201ENSMUST00000201451 1628 ntBASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms