Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Gm14665-201ENSMUST00000122294 557 ntBASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Gm23153-201ENSMUST00000175323 313 ntBASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Gm20781-201ENSMUST00000193154 693 ntBASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Gm21736-201ENSMUST00000195399 693 ntBASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Gm7319-201ENSMUST00000210047 778 ntBASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Gm18514-201ENSMUST00000218980 436 ntBASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Prrxl1-205ENSMUST00000228878 723 ntBASIC10.8□□□□□ -0.68
Rpp38Q80UU2 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Rpp38Q80UU2 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Dyrk1a-203ENSMUST00000122284 2356 ntTSL 5 BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Gm22876-201ENSMUST00000175450 298 ntBASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Gm9135-201ENSMUST00000182963 990 ntBASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Mir7035-201ENSMUST00000184713 82 ntBASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Gm37365-201ENSMUST00000193109 409 ntBASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Gm42780-201ENSMUST00000197083 734 ntBASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Gm5881-201ENSMUST00000204737 367 ntBASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Gm42449-201ENSMUST00000200349 2258 ntBASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rpp38Q80UU2 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Gm11422-201ENSMUST00000118925 1103 ntBASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Gm13445-201ENSMUST00000121664 307 ntBASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms