Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ctdp1Q7TSG2 Gm25125-201ENSMUST00000083340 136 ntBASIC11.76□□□□□ -0.53
Ctdp1Q7TSG2 Gm10179-201ENSMUST00000086233 688 ntBASIC11.76□□□□□ -0.53
Ctdp1Q7TSG2 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ctdp1Q7TSG2 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ctdp1Q7TSG2 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.76□□□□□ -0.53
Ctdp1Q7TSG2 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ctdp1Q7TSG2 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ctdp1Q7TSG2 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ctdp1Q7TSG2 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ctdp1Q7TSG2 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ctdp1Q7TSG2 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ctdp1Q7TSG2 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ctdp1Q7TSG2 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ctdp1Q7TSG2 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 Gm11956-201ENSMUST00000119525 512 ntBASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 Gm4726-201ENSMUST00000135604 736 ntBASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 Gm6019-201ENSMUST00000148369 736 ntBASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 Gm17391-201ENSMUST00000171036 126 ntBASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 Gm19246-201ENSMUST00000173599 255 ntBASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 Gm21092-201ENSMUST00000178995 955 ntBASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 Gm45398-201ENSMUST00000210561 165 ntBASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 CT025645.2-201ENSMUST00000223278 3827 ntBASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC11.75□□□□□ -0.53
Ctdp1Q7TSG2 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 Gm4294-201ENSMUST00000105169 614 ntBASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 Gm23694-201ENSMUST00000179335 110 ntBASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 Gm27438-201ENSMUST00000183480 110 ntBASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 Gm45550-201ENSMUST00000209380 946 ntBASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 Gm9132-201ENSMUST00000210182 832 ntBASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 Gm9111-201ENSMUST00000219394 709 ntBASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 AC154436.1-201ENSMUST00000227272 782 ntBASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 Gm21817-201ENSMUST00000178584 2583 ntBASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 Gm44445-201ENSMUST00000204075 2683 ntBASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 Gm42851-201ENSMUST00000201325 1411 ntBASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ctdp1Q7TSG2 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms