Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 Gm12377-201ENSMUST00000118656 252 ntBASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 Gm14650-201ENSMUST00000120400 889 ntBASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 Gm13842-202ENSMUST00000156331 865 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 Gm23432-201ENSMUST00000157181 131 ntBASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 Gm22994-201ENSMUST00000175422 82 ntBASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 Mir7088-201ENSMUST00000184227 86 ntBASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Matn2-203ENSMUST00000226766 3252 ntBASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Gm19090-201ENSMUST00000218187 774 ntBASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Gm38048-201ENSMUST00000193778 2174 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx55Q6ZPL9 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.28□□□□□ -0.44
Ddx55Q6ZPL9 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ddx55Q6ZPL9 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.28□□□□□ -0.44
Ddx55Q6ZPL9 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.28□□□□□ -0.44
Ddx55Q6ZPL9 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ddx55Q6ZPL9 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ddx55Q6ZPL9 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ddx55Q6ZPL9 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ddx55Q6ZPL9 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.28□□□□□ -0.44
Ddx55Q6ZPL9 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ddx55Q6ZPL9 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ddx55Q6ZPL9 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ddx55Q6ZPL9 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ddx55Q6ZPL9 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ddx55Q6ZPL9 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ddx55Q6ZPL9 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ddx55Q6ZPL9 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ddx55Q6ZPL9 Gm24470-201ENSMUST00000104486 132 ntBASIC12.28□□□□□ -0.44
Ddx55Q6ZPL9 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ddx55Q6ZPL9 Gm13326-201ENSMUST00000118730 1011 ntBASIC12.28□□□□□ -0.44
Ddx55Q6ZPL9 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC12.28□□□□□ -0.44
Ddx55Q6ZPL9 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC12.28□□□□□ -0.44
Ddx55Q6ZPL9 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ddx55Q6ZPL9 Gm5501-201ENSMUST00000165917 832 ntBASIC12.28□□□□□ -0.44
Ddx55Q6ZPL9 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ddx55Q6ZPL9 Gm5543-201ENSMUST00000193329 1091 ntBASIC12.28□□□□□ -0.44
Ddx55Q6ZPL9 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms