Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Tdp1-201ENSMUST00000021594 2019 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Gm6641-201ENSMUST00000196100 1315 ntBASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Tada2a-201ENSMUST00000018795 2151 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Gm15352-201ENSMUST00000118696 270 ntBASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Gm6506-201ENSMUST00000119775 1136 ntBASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Gm36991-201ENSMUST00000191800 648 ntBASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Gstp-ps-201ENSMUST00000195526 631 ntBASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Gm19324-201ENSMUST00000213229 1169 ntBASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 CT009764.1-201ENSMUST00000222260 483 ntBASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 CT025694.1-201ENSMUST00000226188 934 ntBASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 CT025679.1-201ENSMUST00000227106 449 ntBASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Adcy3-201ENSMUST00000020984 4348 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Zscan21-203ENSMUST00000110959 2964 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 AC153498.1-201ENSMUST00000219775 2722 ntBASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Tnfrsf9-204ENSMUST00000105672 1999 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Tmed5-205ENSMUST00000119437 3436 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Slc16a5-202ENSMUST00000106532 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Scaf4Q6PFF0 Srpk1-204ENSMUST00000130643 4465 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 9630001P10Rik-201ENSMUST00000181083 2799 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Tor1aip2-204ENSMUST00000111754 2491 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Gm42571-201ENSMUST00000201197 2464 ntBASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Mir680-2-201ENSMUST00000102163 110 ntBASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Gm23251-201ENSMUST00000103773 110 ntBASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Gm13422-201ENSMUST00000118834 504 ntBASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Gm12856-201ENSMUST00000119471 1293 ntBASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms