Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rad54bQ6PFE3 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rad54bQ6PFE3 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rad54bQ6PFE3 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Rad54bQ6PFE3 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Rad54bQ6PFE3 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rad54bQ6PFE3 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rad54bQ6PFE3 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Rad54bQ6PFE3 Zbtb3-201ENSMUST00000172175 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rad54bQ6PFE3 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rad54bQ6PFE3 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rad54bQ6PFE3 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rad54bQ6PFE3 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rad54bQ6PFE3 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rad54bQ6PFE3 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Rad54bQ6PFE3 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rad54bQ6PFE3 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rad54bQ6PFE3 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Gm42602-201ENSMUST00000200288 3224 ntBASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Gm6655-201ENSMUST00000201932 1309 ntBASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Gm21817-201ENSMUST00000178584 2583 ntBASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Il18bp-202ENSMUST00000209368 2596 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Gm5944-201ENSMUST00000118182 1001 ntBASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Gm33080-201ENSMUST00000205429 172 ntBASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 AC124433.1-201ENSMUST00000224483 1063 ntBASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Itga7-202ENSMUST00000218290 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Gm6714-201ENSMUST00000218677 2330 ntBASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Gm42971-201ENSMUST00000199228 2079 ntBASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 B4galt4-204ENSMUST00000114711 1481 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rad54bQ6PFE3 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Gm37058-201ENSMUST00000193393 1644 ntBASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Adcy6-205ENSMUST00000228566 3707 ntAPPRIS ALT1 BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Gm12389-201ENSMUST00000117696 418 ntBASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Gm10051-201ENSMUST00000145209 414 ntBASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Rad54bQ6PFE3 Gm6407-201ENSMUST00000176468 549 ntBASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms