Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Gm14858-201ENSMUST00000138614 1758 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Gm15580-201ENSMUST00000121587 556 ntBASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Gm18122-201ENSMUST00000211390 904 ntBASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Dppa5a-201ENSMUST00000071991 619 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Mgst2-201ENSMUST00000099106 603 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Rad52-212ENSMUST00000162461 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Gm43362-201ENSMUST00000198192 2470 ntBASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Gps2-203ENSMUST00000116358 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Maats1os-201ENSMUST00000133496 326 ntTSL 3 BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Gm14437-201ENSMUST00000152284 360 ntTSL 5 BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Gm4398-201ENSMUST00000182698 992 ntBASIC9.93□□□□□ -0.82
Spg11Q3UHA3 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Gm17806-201ENSMUST00000195844 383 ntBASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Actl9-201ENSMUST00000174088 1373 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Rfx6-202ENSMUST00000122922 3464 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Glns-ps1-201ENSMUST00000120291 1118 ntBASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Gm12637-201ENSMUST00000130501 368 ntTSL 3 BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Gm20529-201ENSMUST00000173683 203 ntTSL 5 BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Gm9637-201ENSMUST00000179141 873 ntBASIC9.92□□□□□ -0.82
Spg11Q3UHA3 D030068K23Rik-203ENSMUST00000181098 1399 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Gm2316-201ENSMUST00000190613 921 ntBASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Gm45437-202ENSMUST00000211418 694 ntTSL 3 BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Platr25-206ENSMUST00000222303 1171 ntTSL 5 BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Opn1mw-201ENSMUST00000033771 1227 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Cnfn-201ENSMUST00000076276 524 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Npm1-202ENSMUST00000093201 1192 ntTSL 5 BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Gm13120-201ENSMUST00000117343 1446 ntBASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Gm13104-201ENSMUST00000119651 1446 ntBASIC9.92□□□□□ -0.82
Spg11Q3UHA3 Gm36990-201ENSMUST00000191961 1412 ntBASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms