Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Gm25661-201ENSMUST00000157704 296 ntBASIC11.44□□□□□ -0.58
Trim43aQ3TL54 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Gm17831-201ENSMUST00000205579 900 ntBASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Gm45550-201ENSMUST00000209380 946 ntBASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.44□□□□□ -0.58
Trim43aQ3TL54 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.44□□□□□ -0.58
Trim43aQ3TL54 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Gm37516-201ENSMUST00000192593 1954 ntBASIC11.44□□□□□ -0.58
Trim43aQ3TL54 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Gm37447-201ENSMUST00000195625 2928 ntBASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Gm12986-201ENSMUST00000119037 967 ntBASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.43□□□□□ -0.58
Trim43aQ3TL54 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Gm24514-201ENSMUST00000174961 285 ntBASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Mir3547-201ENSMUST00000175461 88 ntBASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Gm27953-201ENSMUST00000185171 143 ntBASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Gm9555-201ENSMUST00000200908 583 ntBASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Gm45118-201ENSMUST00000208928 825 ntBASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Gm5468-202ENSMUST00000227851 682 ntBASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 AC117648.1-201ENSMUST00000219777 2510 ntBASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC11.43□□□□□ -0.58
Trim43aQ3TL54 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Gm43052-201ENSMUST00000201451 1628 ntBASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Gm42427-201ENSMUST00000200473 5292 ntBASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.42□□□□□ -0.58
Trim43aQ3TL54 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Mir7686-201ENSMUST00000200604 57 ntBASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Gm10179-201ENSMUST00000086233 688 ntBASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms