Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 n-R5s113-201ENSMUST00000179143 119 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 n-R5s133-201ENSMUST00000179275 119 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 n-R5s117-201ENSMUST00000179431 119 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 Gm25212-201ENSMUST00000179432 119 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 n-R5s138-201ENSMUST00000179476 119 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 n-R5s122-201ENSMUST00000179500 119 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 n-R5s143-201ENSMUST00000179542 119 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 n-R5s107-201ENSMUST00000179704 119 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 Gm26391-201ENSMUST00000179843 119 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 n-R5s110-201ENSMUST00000179995 119 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 n-R5s128-201ENSMUST00000180096 119 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 n-R5s124-201ENSMUST00000180334 119 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC11.02□□□□□ -0.65
Ebf1Q07802 Gm7627-201ENSMUST00000183205 999 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 Gm27440-201ENSMUST00000184785 107 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 Gm21156-201ENSMUST00000189693 869 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ebf1Q07802 Gm37207-201ENSMUST00000194284 296 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 Gm43244-201ENSMUST00000196994 1285 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Ebf1Q07802 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC11.02□□□□□ -0.65
Ebf1Q07802 AC152169.1-201ENSMUST00000223901 701 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 CT030135.2-201ENSMUST00000225255 893 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 AC169511.1-201ENSMUST00000227639 995 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 AC164099.1-201ENSMUST00000227780 333 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ebf1Q07802 Gm24089-201ENSMUST00000093696 109 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 Gm10580-201ENSMUST00000097985 396 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 Gm10582-201ENSMUST00000097987 396 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 Gm10583-201ENSMUST00000097988 396 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ebf1Q07802 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ebf1Q07802 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ebf1Q07802 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ebf1Q07802 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.02□□□□□ -0.65
Ebf1Q07802 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ebf1Q07802 AC022682.1-201ENSMUST00000224624 2023 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 Gm45161-201ENSMUST00000207316 2263 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ebf1Q07802 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ebf1Q07802 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Ebf1Q07802 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ebf1Q07802 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ebf1Q07802 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf1Q07802 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf1Q07802 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.01□□□□□ -0.65
Ebf1Q07802 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf1Q07802 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf1Q07802 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Ebf1Q07802 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf1Q07802 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf1Q07802 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Ebf1Q07802 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf1Q07802 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.01□□□□□ -0.65
Ebf1Q07802 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Ebf1Q07802 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Ebf1Q07802 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf1Q07802 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf1Q07802 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf1Q07802 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf1Q07802 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf1Q07802 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf1Q07802 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Ebf1Q07802 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf1Q07802 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf1Q07802 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf1Q07802 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf1Q07802 Gm12986-201ENSMUST00000119037 967 ntBASIC11.01□□□□□ -0.65
Ebf1Q07802 Gng5-ps-201ENSMUST00000120931 205 ntBASIC11.01□□□□□ -0.65
Ebf1Q07802 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf1Q07802 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf1Q07802 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC11.01□□□□□ -0.65
Ebf1Q07802 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC11.01□□□□□ -0.65
Ebf1Q07802 Gm6352-201ENSMUST00000203583 1134 ntBASIC11.01□□□□□ -0.65
Ebf1Q07802 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf1Q07802 Gm4930-201ENSMUST00000219926 1087 ntBASIC11.01□□□□□ -0.65
Ebf1Q07802 Mir326-201ENSMUST00000083637 95 ntBASIC11.01□□□□□ -0.65
Ebf1Q07802 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf1Q07802 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Ebf1Q07802 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf1Q07802 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf1Q07802 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Ebf1Q07802 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Ebf1Q07802 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Ebf1Q07802 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Ebf1Q07802 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf1Q07802 Gm43167-201ENSMUST00000202001 1606 ntBASIC11.01□□□□□ -0.65
Ebf1Q07802 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf1Q07802 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf1Q07802 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf1Q07802 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Ebf1Q07802 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf1Q07802 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf1Q07802 Gm5822-201ENSMUST00000161562 1378 ntBASIC11.01□□□□□ -0.65
Ebf1Q07802 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf1Q07802 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC11.01□□□□□ -0.65
Ebf1Q07802 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Ebf1Q07802 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Ebf1Q07802 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms