Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm22751-201ENSMUST00000102077 109 ntBASIC13.56□□□□□ -0.24
Smarcc1P97496 Mir692-3-201ENSMUST00000102079 109 ntBASIC13.56□□□□□ -0.24
Smarcc1P97496 Mir692-2-201ENSMUST00000102081 109 ntBASIC13.56□□□□□ -0.24
Smarcc1P97496 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Smarcc1P97496 Snora68-201ENSMUST00000104375 131 ntBASIC13.56□□□□□ -0.24
Smarcc1P97496 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc1P97496 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Smarcc1P97496 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Smarcc1P97496 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Smarcc1P97496 Gm12397-201ENSMUST00000117674 615 ntBASIC13.56□□□□□ -0.24
Smarcc1P97496 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc1P97496 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc1P97496 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC13.56□□□□□ -0.24
Smarcc1P97496 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Smarcc1P97496 Gm22662-201ENSMUST00000175290 256 ntBASIC13.56□□□□□ -0.24
Smarcc1P97496 Gm20694-201ENSMUST00000176943 404 ntBASIC13.56□□□□□ -0.24
Smarcc1P97496 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc1P97496 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Smarcc1P97496 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC13.56□□□□□ -0.24
Smarcc1P97496 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
Smarcc1P97496 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc1P97496 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC13.56□□□□□ -0.24
Smarcc1P97496 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc1P97496 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC13.56□□□□□ -0.24
Smarcc1P97496 Klf10-203ENSMUST00000227920 2144 ntBASIC13.56□□□□□ -0.24
Smarcc1P97496 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc1P97496 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc1P97496 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Smarcc1P97496 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc1P97496 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC13.56□□□□□ -0.24
Smarcc1P97496 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc1P97496 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc1P97496 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc1P97496 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc1P97496 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcc1P97496 Gm5697-201ENSMUST00000122295 2482 ntBASIC13.55□□□□□ -0.24
Smarcc1P97496 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcc1P97496 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcc1P97496 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcc1P97496 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcc1P97496 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcc1P97496 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Smarcc1P97496 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcc1P97496 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcc1P97496 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC13.55□□□□□ -0.24
Smarcc1P97496 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC13.55□□□□□ -0.24
Smarcc1P97496 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC13.55□□□□□ -0.24
Smarcc1P97496 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC13.55□□□□□ -0.24
Smarcc1P97496 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC13.55□□□□□ -0.24
Smarcc1P97496 AC161172.1-201ENSMUST00000227801 486 ntBASIC13.55□□□□□ -0.24
Smarcc1P97496 AC141884.2-201ENSMUST00000228811 775 ntBASIC13.55□□□□□ -0.24
Smarcc1P97496 AC107711.3-201ENSMUST00000228939 1035 ntBASIC13.55□□□□□ -0.24
Smarcc1P97496 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC13.55□□□□□ -0.24
Smarcc1P97496 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.55□□□□□ -0.24
Smarcc1P97496 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC13.55□□□□□ -0.24
Smarcc1P97496 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcc1P97496 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcc1P97496 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC13.55□□□□□ -0.24
Smarcc1P97496 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcc1P97496 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcc1P97496 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC13.55□□□□□ -0.24
Smarcc1P97496 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Smarcc1P97496 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcc1P97496 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Smarcc1P97496 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Smarcc1P97496 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc1P97496 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc1P97496 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc1P97496 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Smarcc1P97496 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc1P97496 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc1P97496 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.54□□□□□ -0.24
Smarcc1P97496 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc1P97496 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc1P97496 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc1P97496 Gm6276-201ENSMUST00000120159 579 ntBASIC13.54□□□□□ -0.24
Smarcc1P97496 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC13.54□□□□□ -0.24
Smarcc1P97496 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC13.54□□□□□ -0.24
Smarcc1P97496 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC13.54□□□□□ -0.24
Smarcc1P97496 Gm12254-201ENSMUST00000134617 471 ntBASIC13.54□□□□□ -0.24
Smarcc1P97496 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC13.54□□□□□ -0.24
Smarcc1P97496 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC13.54□□□□□ -0.24
Smarcc1P97496 Gm44304-201ENSMUST00000200509 145 ntBASIC13.54□□□□□ -0.24
Smarcc1P97496 Gm2716-201ENSMUST00000212350 643 ntBASIC13.54□□□□□ -0.24
Smarcc1P97496 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC13.54□□□□□ -0.24
Smarcc1P97496 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Smarcc1P97496 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc1P97496 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc1P97496 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc1P97496 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc1P97496 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc1P97496 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc1P97496 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC13.54□□□□□ -0.24
Smarcc1P97496 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Smarcc1P97496 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc1P97496 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc1P97496 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.54□□□□□ -0.24
Smarcc1P97496 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC13.54□□□□□ -0.24
Smarcc1P97496 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc1P97496 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms