Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm18042-201ENSMUST00000219887 790 ntBASIC9.75□□□□□ -0.85
SgcbP82349 AC159196.1-201ENSMUST00000225524 377 ntBASIC9.75□□□□□ -0.85
SgcbP82349 AC165260.4-201ENSMUST00000225924 724 ntBASIC9.75□□□□□ -0.85
SgcbP82349 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC9.75□□□□□ -0.85
SgcbP82349 Gm5739-201ENSMUST00000208601 1703 ntBASIC9.75□□□□□ -0.85
SgcbP82349 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
SgcbP82349 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Gm6560-201ENSMUST00000198588 1591 ntBASIC9.75□□□□□ -0.85
SgcbP82349 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
SgcbP82349 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Gm21939-201ENSMUST00000221137 2773 ntBASIC9.75□□□□□ -0.85
SgcbP82349 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SgcbP82349 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
SgcbP82349 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC9.74□□□□□ -0.85
SgcbP82349 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SgcbP82349 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcbP82349 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC9.74□□□□□ -0.85
SgcbP82349 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
SgcbP82349 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcbP82349 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcbP82349 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SgcbP82349 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcbP82349 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
SgcbP82349 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcbP82349 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SgcbP82349 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcbP82349 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcbP82349 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
SgcbP82349 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcbP82349 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SgcbP82349 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
SgcbP82349 Gm25509-201ENSMUST00000116985 106 ntBASIC9.74□□□□□ -0.85
SgcbP82349 Gm14592-201ENSMUST00000117201 560 ntBASIC9.74□□□□□ -0.85
SgcbP82349 Gm14219-201ENSMUST00000120414 288 ntBASIC9.74□□□□□ -0.85
SgcbP82349 Gm3828-201ENSMUST00000121817 257 ntBASIC9.74□□□□□ -0.85
SgcbP82349 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC9.74□□□□□ -0.85
SgcbP82349 Cgrrf1-203ENSMUST00000133989 873 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SgcbP82349 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC9.74□□□□□ -0.85
SgcbP82349 Gm17221-201ENSMUST00000163909 481 ntBASIC9.74□□□□□ -0.85
SgcbP82349 Gm17073-201ENSMUST00000168069 556 ntBASIC9.74□□□□□ -0.85
SgcbP82349 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC9.74□□□□□ -0.85
SgcbP82349 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC9.74□□□□□ -0.85
SgcbP82349 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC9.74□□□□□ -0.85
SgcbP82349 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC9.74□□□□□ -0.85
SgcbP82349 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC9.74□□□□□ -0.85
SgcbP82349 Gm42516-201ENSMUST00000198691 767 ntBASIC9.74□□□□□ -0.85
SgcbP82349 Gm5302-201ENSMUST00000202130 796 ntBASIC9.74□□□□□ -0.85
SgcbP82349 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC9.74□□□□□ -0.85
SgcbP82349 AC132384.6-201ENSMUST00000218976 1206 ntBASIC9.74□□□□□ -0.85
SgcbP82349 Gm3619-201ENSMUST00000219947 775 ntBASIC9.74□□□□□ -0.85
SgcbP82349 AC115304.2-201ENSMUST00000226399 332 ntBASIC9.74□□□□□ -0.85
SgcbP82349 CT025618.1-203ENSMUST00000227008 589 ntBASIC9.74□□□□□ -0.85
SgcbP82349 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcbP82349 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcbP82349 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcbP82349 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
SgcbP82349 Eea1-201ENSMUST00000053484 7749 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcbP82349 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SgcbP82349 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
SgcbP82349 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcbP82349 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcbP82349 Rest-201ENSMUST00000080359 7004 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcbP82349 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcbP82349 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
SgcbP82349 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcbP82349 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SgcbP82349 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC9.74□□□□□ -0.85
SgcbP82349 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SgcbP82349 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcbP82349 Gm33366-201ENSMUST00000195583 3827 ntBASIC9.74□□□□□ -0.85
SgcbP82349 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcbP82349 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcbP82349 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
SgcbP82349 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcbP82349 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
SgcbP82349 Gm6831-202ENSMUST00000213025 1673 ntBASIC9.74□□□□□ -0.85
SgcbP82349 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcbP82349 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
SgcbP82349 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SgcbP82349 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
SgcbP82349 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SgcbP82349 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms