Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Rpl6-201ENSMUST00000031617 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cux2P70298 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cux2P70298 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cux2P70298 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cux2P70298 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cux2P70298 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cux2P70298 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cux2P70298 Smok3c-202ENSMUST00000178402 1515 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Cux2P70298 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cux2P70298 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cux2P70298 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC17.36■□□□□ 0.37
Cux2P70298 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC17.36■□□□□ 0.37
Cux2P70298 Gm46339-201ENSMUST00000222720 3539 ntBASIC17.36■□□□□ 0.37
Cux2P70298 AC117194.1-201ENSMUST00000224847 3002 ntBASIC17.36■□□□□ 0.37
Cux2P70298 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Cux2P70298 AC149588.2-201ENSMUST00000228182 1859 ntBASIC17.36■□□□□ 0.37
Cux2P70298 Gm12619-201ENSMUST00000117369 385 ntBASIC17.36■□□□□ 0.37
Cux2P70298 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC17.36■□□□□ 0.37
Cux2P70298 Gm11789-205ENSMUST00000148579 649 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cux2P70298 Gm27953-201ENSMUST00000185171 143 ntBASIC17.36■□□□□ 0.37
Cux2P70298 Gm37261-201ENSMUST00000194360 1101 ntBASIC17.36■□□□□ 0.37
Cux2P70298 AC112259.1-201ENSMUST00000222891 853 ntTSL 2 BASIC17.36■□□□□ 0.37
Cux2P70298 Spaca5-201ENSMUST00000040437 640 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cux2P70298 1810009J06Rik-201ENSMUST00000076638 882 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cux2P70298 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cux2P70298 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cux2P70298 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cux2P70298 AC153566.1-201ENSMUST00000216441 2057 ntBASIC17.36■□□□□ 0.37
Cux2P70298 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cux2P70298 Ttc23-203ENSMUST00000107471 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cux2P70298 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cux2P70298 Prpf18-204ENSMUST00000152362 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cux2P70298 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cux2P70298 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cux2P70298 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cux2P70298 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cux2P70298 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cux2P70298 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cux2P70298 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cux2P70298 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Cux2P70298 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cux2P70298 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cux2P70298 Gm12499-201ENSMUST00000121961 546 ntBASIC17.35■□□□□ 0.37
Cux2P70298 Gm12570-201ENSMUST00000122047 1030 ntBASIC17.35■□□□□ 0.37
Cux2P70298 Gm25735-201ENSMUST00000175164 215 ntBASIC17.35■□□□□ 0.37
Cux2P70298 Gm21818-201ENSMUST00000178828 513 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cux2P70298 Gm18538-201ENSMUST00000204265 484 ntBASIC17.35■□□□□ 0.37
Cux2P70298 Gm18539-201ENSMUST00000204745 1090 ntBASIC17.35■□□□□ 0.37
Cux2P70298 Olfr533-201ENSMUST00000071755 1052 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cux2P70298 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cux2P70298 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cux2P70298 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC17.35■□□□□ 0.37
Cux2P70298 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cux2P70298 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cux2P70298 Ifitm7-202ENSMUST00000178021 1823 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Cux2P70298 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cux2P70298 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cux2P70298 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cux2P70298 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cux2P70298 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cux2P70298 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Cux2P70298 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cux2P70298 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cux2P70298 Gm13361-201ENSMUST00000119977 1431 ntBASIC17.34■□□□□ 0.37
Cux2P70298 Rpl7a-ps13-201ENSMUST00000121692 563 ntBASIC17.34■□□□□ 0.37
Cux2P70298 Gm14138-201ENSMUST00000122061 745 ntBASIC17.34■□□□□ 0.37
Cux2P70298 Gm6286-201ENSMUST00000145247 762 ntBASIC17.34■□□□□ 0.37
Cux2P70298 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC17.34■□□□□ 0.37
Cux2P70298 Arpp19-207ENSMUST00000169188 216 ntTSL 5 BASIC17.34■□□□□ 0.37
Cux2P70298 Gm2238-201ENSMUST00000192074 3669 ntBASIC17.34■□□□□ 0.37
Cux2P70298 Gm6069-201ENSMUST00000196501 463 ntBASIC17.34■□□□□ 0.37
Cux2P70298 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC17.34■□□□□ 0.37
Cux2P70298 AC124732.3-201ENSMUST00000221835 1765 ntBASIC17.34■□□□□ 0.37
Cux2P70298 AC170810.2-201ENSMUST00000228384 1232 ntBASIC17.34■□□□□ 0.37
Cux2P70298 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cux2P70298 Cst13-201ENSMUST00000046589 783 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cux2P70298 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cux2P70298 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cux2P70298 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC17.34■□□□□ 0.37
Cux2P70298 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cux2P70298 Sh2d6-201ENSMUST00000089687 1162 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cux2P70298 Olfr30-202ENSMUST00000215691 2404 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cux2P70298 AC153380.1-201ENSMUST00000214959 2364 ntBASIC17.34■□□□□ 0.37
Cux2P70298 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cux2P70298 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cux2P70298 Il1f5-206ENSMUST00000168941 1722 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Cux2P70298 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cux2P70298 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cux2P70298 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cux2P70298 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
Cux2P70298 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cux2P70298 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cux2P70298 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
Cux2P70298 Odam-201ENSMUST00000113274 872 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cux2P70298 Gm12004-201ENSMUST00000117869 718 ntBASIC17.33■□□□□ 0.36
Cux2P70298 Gm11546-201ENSMUST00000120297 354 ntBASIC17.33■□□□□ 0.36
Cux2P70298 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC17.33■□□□□ 0.36
Cux2P70298 Gm16574-201ENSMUST00000159301 745 ntBASIC17.33■□□□□ 0.36
Cux2P70298 Gnb2-214ENSMUST00000168746 802 ntTSL 5 BASIC17.33■□□□□ 0.36
Cux2P70298 Trav4-1-201ENSMUST00000199078 330 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms