Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ybx1P62960 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.1□□□□□ -0.63
Ybx1P62960 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ybx1P62960 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC11.1□□□□□ -0.63
Ybx1P62960 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Ybx1P62960 Zcwpw2-203ENSMUST00000187803 372 ntBASIC11.1□□□□□ -0.63
Ybx1P62960 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC11.1□□□□□ -0.63
Ybx1P62960 Gm40414-201ENSMUST00000197608 481 ntBASIC11.1□□□□□ -0.63
Ybx1P62960 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ybx1P62960 Gm45481-201ENSMUST00000209717 877 ntBASIC11.1□□□□□ -0.63
Ybx1P62960 Gm45893-201ENSMUST00000211899 247 ntBASIC11.1□□□□□ -0.63
Ybx1P62960 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ybx1P62960 Gm3926-201ENSMUST00000223378 1123 ntBASIC11.1□□□□□ -0.63
Ybx1P62960 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ybx1P62960 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ybx1P62960 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ybx1P62960 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Ybx1P62960 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ybx1P62960 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC11.1□□□□□ -0.63
Ybx1P62960 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ybx1P62960 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.1□□□□□ -0.63
Ybx1P62960 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ybx1P62960 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ybx1P62960 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Ybx1P62960 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.1□□□□□ -0.63
Ybx1P62960 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ybx1P62960 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ybx1P62960 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Ybx1P62960 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ybx1P62960 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ybx1P62960 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ybx1P62960 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ybx1P62960 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.1□□□□□ -0.63
Ybx1P62960 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ybx1P62960 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Ybx1P62960 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ybx1P62960 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ybx1P62960 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ybx1P62960 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.09□□□□□ -0.63
Ybx1P62960 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ybx1P62960 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ybx1P62960 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ybx1P62960 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ybx1P62960 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ybx1P62960 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Ybx1P62960 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ybx1P62960 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ybx1P62960 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ybx1P62960 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ybx1P62960 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ybx1P62960 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ybx1P62960 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ybx1P62960 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Ybx1P62960 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Ybx1P62960 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ybx1P62960 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ybx1P62960 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC11.09□□□□□ -0.63
Ybx1P62960 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC11.09□□□□□ -0.63
Ybx1P62960 Gm12028-201ENSMUST00000118065 436 ntBASIC11.09□□□□□ -0.63
Ybx1P62960 Gm12463-201ENSMUST00000118271 849 ntBASIC11.09□□□□□ -0.63
Ybx1P62960 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC11.09□□□□□ -0.63
Ybx1P62960 Gm13688-201ENSMUST00000121557 608 ntBASIC11.09□□□□□ -0.63
Ybx1P62960 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC11.09□□□□□ -0.63
Ybx1P62960 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ybx1P62960 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC11.09□□□□□ -0.63
Ybx1P62960 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ybx1P62960 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ybx1P62960 Mipep-ps-201ENSMUST00000177439 291 ntBASIC11.09□□□□□ -0.63
Ybx1P62960 Mir8111-201ENSMUST00000184463 137 ntBASIC11.09□□□□□ -0.63
Ybx1P62960 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC11.09□□□□□ -0.63
Ybx1P62960 Gm7430-201ENSMUST00000193824 1144 ntBASIC11.09□□□□□ -0.63
Ybx1P62960 Gm18555-201ENSMUST00000197935 584 ntBASIC11.09□□□□□ -0.63
Ybx1P62960 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC11.09□□□□□ -0.63
Ybx1P62960 AC155300.1-201ENSMUST00000219134 480 ntBASIC11.09□□□□□ -0.63
Ybx1P62960 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ybx1P62960 Gm18042-201ENSMUST00000219887 790 ntBASIC11.09□□□□□ -0.63
Ybx1P62960 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC11.09□□□□□ -0.63
Ybx1P62960 AC101205.2-201ENSMUST00000226206 715 ntBASIC11.09□□□□□ -0.63
Ybx1P62960 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ybx1P62960 Gm5278-201ENSMUST00000055957 552 ntBASIC11.09□□□□□ -0.63
Ybx1P62960 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ybx1P62960 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Ybx1P62960 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Ybx1P62960 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ybx1P62960 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ybx1P62960 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ybx1P62960 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.09□□□□□ -0.63
Ybx1P62960 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ybx1P62960 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ybx1P62960 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ybx1P62960 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ybx1P62960 Gfra2-203ENSMUST00000227697 1323 ntBASIC11.09□□□□□ -0.63
Ybx1P62960 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
Ybx1P62960 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ybx1P62960 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ybx1P62960 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ybx1P62960 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ybx1P62960 AC153524.2-202ENSMUST00000220401 1794 ntBASIC11.08□□□□□ -0.64
Ybx1P62960 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ybx1P62960 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms