Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC11.43□□□□□ -0.58
Shmt1P50431 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt1P50431 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt1P50431 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt1P50431 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt1P50431 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt1P50431 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt1P50431 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt1P50431 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt1P50431 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt1P50431 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC11.43□□□□□ -0.58
Shmt1P50431 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt1P50431 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt1P50431 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt1P50431 Gm5764-201ENSMUST00000118817 885 ntBASIC11.43□□□□□ -0.58
Shmt1P50431 Gm15036-201ENSMUST00000118880 400 ntBASIC11.43□□□□□ -0.58
Shmt1P50431 Gm15196-201ENSMUST00000121406 482 ntBASIC11.43□□□□□ -0.58
Shmt1P50431 Gm15620-201ENSMUST00000122949 270 ntBASIC11.43□□□□□ -0.58
Shmt1P50431 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC11.43□□□□□ -0.58
Shmt1P50431 n-R5s130-201ENSMUST00000178128 119 ntBASIC11.43□□□□□ -0.58
Shmt1P50431 Gm24312-201ENSMUST00000178677 119 ntBASIC11.43□□□□□ -0.58
Shmt1P50431 n-R5s106-201ENSMUST00000179060 119 ntBASIC11.43□□□□□ -0.58
Shmt1P50431 n-R5s118-201ENSMUST00000179887 119 ntBASIC11.43□□□□□ -0.58
Shmt1P50431 Gm9162-201ENSMUST00000182081 991 ntBASIC11.43□□□□□ -0.58
Shmt1P50431 Mir6941-201ENSMUST00000184711 59 ntBASIC11.43□□□□□ -0.58
Shmt1P50431 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC11.43□□□□□ -0.58
Shmt1P50431 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt1P50431 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt1P50431 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt1P50431 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Shmt1P50431 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt1P50431 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.43□□□□□ -0.58
Shmt1P50431 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt1P50431 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt1P50431 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Shmt1P50431 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt1P50431 Gm45124-201ENSMUST00000206723 2755 ntBASIC11.43□□□□□ -0.58
Shmt1P50431 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Shmt1P50431 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt1P50431 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt1P50431 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt1P50431 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt1P50431 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt1P50431 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt1P50431 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt1P50431 Gm28624-201ENSMUST00000186430 2131 ntBASIC11.42□□□□□ -0.58
Shmt1P50431 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt1P50431 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Shmt1P50431 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt1P50431 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Shmt1P50431 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Shmt1P50431 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt1P50431 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt1P50431 Gm8684-201ENSMUST00000195078 1564 ntBASIC11.42□□□□□ -0.58
Shmt1P50431 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt1P50431 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt1P50431 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt1P50431 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt1P50431 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt1P50431 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt1P50431 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt1P50431 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt1P50431 Gm23612-201ENSMUST00000103823 110 ntBASIC11.42□□□□□ -0.58
Shmt1P50431 Gm22937-201ENSMUST00000103954 131 ntBASIC11.42□□□□□ -0.58
Shmt1P50431 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC11.42□□□□□ -0.58
Shmt1P50431 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC11.42□□□□□ -0.58
Shmt1P50431 Gm11979-201ENSMUST00000119629 743 ntBASIC11.42□□□□□ -0.58
Shmt1P50431 Gm12453-201ENSMUST00000121981 331 ntBASIC11.42□□□□□ -0.58
Shmt1P50431 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt1P50431 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC11.42□□□□□ -0.58
Shmt1P50431 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt1P50431 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt1P50431 Gm23576-201ENSMUST00000179918 110 ntBASIC11.42□□□□□ -0.58
Shmt1P50431 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt1P50431 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt1P50431 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Shmt1P50431 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC11.42□□□□□ -0.58
Shmt1P50431 Gm43460-201ENSMUST00000202491 1057 ntBASIC11.42□□□□□ -0.58
Shmt1P50431 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC11.42□□□□□ -0.58
Shmt1P50431 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt1P50431 AC124581.2-201ENSMUST00000225459 282 ntBASIC11.42□□□□□ -0.58
Shmt1P50431 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Shmt1P50431 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Shmt1P50431 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt1P50431 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Shmt1P50431 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Shmt1P50431 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt1P50431 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt1P50431 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Shmt1P50431 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt1P50431 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt1P50431 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Shmt1P50431 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.42□□□□□ -0.58
Shmt1P50431 Gm5697-201ENSMUST00000122295 2482 ntBASIC11.42□□□□□ -0.58
Shmt1P50431 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt1P50431 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt1P50431 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shmt1P50431 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Shmt1P50431 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shmt1P50431 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms